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癌症单细胞测序的全球及当前研究趋势:一项文献计量学与可视化研究

Global and Current Research Trends of Single-Cell Sequencing in Cancer: A Bibliometric and Visualization Study.

作者信息

Song Xiuyun, Niu Heyuan, Li Kaiyu, Zhang Maorun, Ji Zhe, Zhang Qi, Yu Tao, Liu Gang

机构信息

Department of Operating Theatre, Tianjin Medical University General Hospital.

Department of General Surgery, Tianjin Medical University General Hospital, Tianjin Medical University.

出版信息

J Vis Exp. 2025 Apr 18(218). doi: 10.3791/67880.

Abstract

Cancer poses a significant challenge to human health due to its complex biological systems, necessitating in-depth analysis. Single-cell sequencing has become an essential tool for investigating these systems, enabling the detection of gene expression and epigenetic modifications at the single-cell level. To elucidate research trends, collaboration networks, and knowledge dissemination in this field, a bibliometric analysis was conducted using the Web of Science Core Collection database, covering publications from January 1, 2010, to December 31, 2023. The Bibliometrix package in R was used to extract and analyze key publication data, including document types, countries, institutions, authors, and keywords. Additionally, CiteSpace, VOSviewer, and the Online Analysis Platform of Literature Metrology were employed for data compilation and visualization. The analysis identified 34,074 authors from 3,129 institutions across 75 countries and regions, contributing to 5,680 publications on single-cell sequencing in cancer, published in 788 academic journals. China and the United States emerged as the leading nations in publication volume. Harvard University produced the highest number of publications (320), with Aviv Regev, affiliated with Harvard, recognized as a key contributor. Leading journals, such as Frontiers in Immunology and Nature Communications, highlight both established and emerging research areas, including the immune microenvironment and immunotherapy. Key trends and potential areas for future research include intra-tumor heterogeneity, clonal evolution, and drug delivery systems. This study provides a comprehensive overview of single-cell sequencing research in oncology, emphasizing its rapid progress, driven by technological advancements and international collaborations. Strengthening global partnerships, developing integrative analytical tools, and addressing data complexities will be crucial for advancing personalized cancer therapies and deepening insights into cancer biology.

摘要

癌症因其复杂的生物系统对人类健康构成重大挑战,需要进行深入分析。单细胞测序已成为研究这些系统的重要工具,能够在单细胞水平检测基因表达和表观遗传修饰。为了阐明该领域的研究趋势、合作网络和知识传播情况,使用科学网核心合集数据库进行了文献计量分析,涵盖2010年1月1日至2023年12月31日发表的文献。利用R语言中的Bibliometrix软件包提取和分析关键的文献数据,包括文献类型、国家、机构、作者和关键词。此外,还使用了CiteSpace、VOSviewer和文献计量在线分析平台进行数据整理和可视化。分析确定了来自75个国家和地区3129个机构的34074名作者,他们在788种学术期刊上发表了5680篇关于癌症单细胞测序的文献。中国和美国是发表量领先的国家。哈佛大学发表的文献数量最多(320篇),隶属于哈佛大学的阿维夫·雷格夫被认为是关键贡献者。《免疫学前沿》和《自然通讯》等领先期刊突出了既定和新兴的研究领域,包括免疫微环境和免疫疗法。未来研究的关键趋势和潜在领域包括肿瘤内异质性、克隆进化和药物递送系统。本研究全面概述了肿瘤学中的单细胞测序研究,强调了其在技术进步和国际合作推动下的快速进展。加强全球伙伴关系、开发综合分析工具以及解决数据复杂性对于推进个性化癌症治疗和深化对癌症生物学的认识至关重要。

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