Clay Sloane, Leon Alejandro, Wall Luke A, Zambrano Regina M
Department of Genetics, Louisiana State University Health Sciences Center New Orleans, New Orleans, Louisiana, USA.
Department of Pediatric Ophthalmology, Manning Family Children's, New Orleans, Louisiana, USA.
Am J Med Genet A. 2025 Sep;197(9):e64083. doi: 10.1002/ajmg.a.64083. Epub 2025 May 6.
DHX16, a member of the DexD/H-box RNA helicase family, facilitates ATP-dependent unwinding of RNA secondary structures. Pathogenic variants cause poor functioning of the spliceosome complex leading to intron retention in gene transcripts. Clinically, it is associated with neuromuscular oculoauditory syndrome (MIM #618733). To date, there are nine published cases. We report a tenth case: a 3-year-old female, initially presented at 7 months of age, with mild developmental delay, ocular anomalies, dysmorphia, and increased infections. An inherited retinal disorder panel identified nondiagnostic variants of uncertain significance. Trio exome sequencing revealed a de novo Likely Pathogenic DHX16 variant, c.692G>C; p.R231P. Published cases of DHX16-related disorders report developmental delay/intellectual disability, seizures, myopathy, retinal anomalies, myopia, nystagmus, and hearing loss. No published variants to date are located upstream of the start of the helicase domain, and little is known about upstream domains. In silico analysis demonstrates evidence of pathogenicity, while Missense3D modeling demonstrates no structural damage to the protein. These findings are consistent with current literature, suggesting a mechanism of pathogenicity that is difficult to assess via modeling. This case illustrates a DHX16 variant in an unknown domain displaying a mild phenotype.
DHX16是DexD/H-box RNA解旋酶家族的成员之一,可促进ATP依赖的RNA二级结构解旋。致病变异会导致剪接体复合物功能异常,从而导致基因转录本中内含子保留。临床上,它与神经肌肉眼听觉综合征(MIM #618733)相关。迄今为止,已发表了9例病例。我们报告第10例:一名3岁女性,7个月大时首次就诊,有轻度发育迟缓、眼部异常、畸形和感染增加。遗传性视网膜疾病检测发现意义不确定的非诊断性变异。三联体全外显子测序揭示了一个新发的可能致病的DHX16变异,c.692G>C;p.R231P。已发表的与DHX16相关疾病的病例报告有发育迟缓/智力残疾、癫痫、肌病、视网膜异常、近视、眼球震颤和听力丧失。迄今为止,尚未有已发表的变异位于解旋酶结构域起始上游,对上游结构域了解甚少。计算机分析证明了其致病性,而错义3D建模显示该蛋白无结构损伤。这些发现与当前文献一致,提示一种难以通过建模评估的致病机制。本病例说明了一个位于未知结构域的DHX16变异表现出轻度表型。