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基因变体rs255758使印度西北部人群易患类风湿性关节炎。

Gene Variant rs255758 Provides Susceptibility to Rheumatoid Arthritis in Northwest Indian Population.

作者信息

Sandhu Inder Mohan Singh, Singh Hemender, Kaur Simranpreet, Rai Ekta, Mahajan Anupama, Mohan Gurinder, Sharma Swarkar

机构信息

Department of Genetics, Sri Guru Ram Das Institute of Medical Sciences and Research, SGRDUHS, Amritsar, Punjab, India.

Human Genetics Research Group, School of Biotechnology, Shri Mata Vaishno Devi University, Katra, Jammu and Kashmir, India.

出版信息

Int J Appl Basic Med Res. 2025 Jan-Mar;15(1):38-42. doi: 10.4103/ijabmr.ijabmr_156_24. Epub 2025 Jan 9.

DOI:10.4103/ijabmr.ijabmr_156_24
PMID:40336772
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12054651/
Abstract

INTRODUCTION

Rheumatoid arthritis (RA) is a systemic, chronic, and inflammatory autoimmune disease with a strong genetic component. gene variant rs255758 has been reported as a candidate for RA susceptibility. A replication study was performed on this variant by taking 188 RA cases and 310 healthy non-RA controls from northwest India in a case-control association study design.

MATERIALS AND METHODS

DNA isolated from collected blood samples was analyzed by genotyping of the variant on real-time polymerase chain reaction using TaqMan Allele Discrimination Assay and statistically analyzed.

RESULTS

The variant was found to follow Hardy-Weinberg Equilibrium ( = 0.079) in the control group. The variant was significantly associated with RA susceptibility in the present studied population cohort ( = 0.024) with as a risk allele and increased risk in the recessive model ( vs. + ; = 0.004).

CONCLUSION

The present study corroborates the earlier findings on the role of gene variant rs255758 in RA and further contributes to its genetic etiology.

摘要

引言

类风湿性关节炎(RA)是一种具有强烈遗传成分的全身性、慢性炎症性自身免疫疾病。基因变体rs255758已被报道为RA易感性的候选基因。在一项病例对照关联研究设计中,从印度西北部选取了188例RA病例和310名健康非RA对照,对该变体进行了复制研究。

材料与方法

使用TaqMan等位基因鉴别分析通过实时聚合酶链反应对从采集的血样中分离的DNA进行该变体的基因分型分析,并进行统计学分析。

结果

在对照组中发现该变体符合哈迪-温伯格平衡(P = 0.079)。在本研究的人群队列中,该变体与RA易感性显著相关(P = 0.024),其中作为风险等位基因,在隐性模型中风险增加(与+;P = 0.004)。

结论

本研究证实了先前关于基因变体rs255758在RA中的作用的发现,并进一步为其遗传病因学做出了贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b5d/12054651/de449a78bc54/IJABMR-15-38-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b5d/12054651/410f73647ee1/IJABMR-15-38-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b5d/12054651/de449a78bc54/IJABMR-15-38-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b5d/12054651/410f73647ee1/IJABMR-15-38-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b5d/12054651/de449a78bc54/IJABMR-15-38-g002.jpg

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本文引用的文献

1
ARL15, a GTPase implicated in rheumatoid arthritis, potentially repositions its truncated N-terminus as a function of guanine nucleotide binding.ARL15,一种与类风湿关节炎相关的 GTPase,其截断的 N 端可能会随着鸟嘌呤核苷酸结合而重新定位。
Int J Biol Macromol. 2024 Jan;254(Pt 2):127898. doi: 10.1016/j.ijbiomac.2023.127898. Epub 2023 Nov 7.
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Genetics of rheumatoid arthritis.类风湿关节炎的遗传学。
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Correlation between an intronic SNP genotype and ARL15 level in rheumatoid arthritis.
类风湿关节炎中内含子 SNP 基因型与 ARL15 水平的相关性。
J Genet. 2021;100.
4
Computational insight into the three-dimensional structure of ADP ribosylation factor like protein 15, a novel susceptibility gene for rheumatoid arthritis.计算解析 ADP 核糖基化因子样蛋白 15 的三维结构,该蛋白是类风湿关节炎的一个新的易感基因。
J Biomol Struct Dyn. 2022 Jul;40(10):4626-4641. doi: 10.1080/07391102.2020.1860826. Epub 2020 Dec 23.
5
[Genetic polymorphisms of ARL15 and HLA-DMA are associated with rheumatoid arthritis in Han population from northwest China].[ARL15和HLA-DMA基因多态性与中国西北汉族人群类风湿关节炎相关]
Xi Bao Yu Fen Zi Mian Yi Xue Za Zhi. 2017 Dec;33(12):1681-1685.
6
Novel risk loci for rheumatoid arthritis in Han Chinese and congruence with risk variants in Europeans.汉族人群类风湿关节炎的新风险基因座与欧洲人群风险变异一致。
Arthritis Rheumatol. 2014 May;66(5):1121-32. doi: 10.1002/art.38353.
7
Genetics of rheumatoid arthritis contributes to biology and drug discovery.类风湿关节炎的遗传学研究有助于生物学和药物发现。
Nature. 2014 Feb 20;506(7488):376-81. doi: 10.1038/nature12873. Epub 2013 Dec 25.
8
A genome-wide association study reveals ARL15, a novel non-HLA susceptibility gene for rheumatoid arthritis in North Indians.一项全基因组关联研究揭示了ARL15,这是北印度人群中类风湿关节炎的一个新的非HLA易感基因。
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9
ACR/EULAR 2010 rheumatoid arthritis classification criteria.ACR/EULAR 2010 类风湿关节炎分类标准。
Rheumatology (Oxford). 2012 Dec;51 Suppl 6:vi5-9. doi: 10.1093/rheumatology/kes279.
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Ann Rheum Dis. 2012 Oct;71(10):1724-32. doi: 10.1136/annrheumdis-2011-200924. Epub 2012 Apr 24.