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氢氘交换质谱法揭示了腺相关病毒衣壳上的pH和温度响应区域以及DNA释放的结构基础。

HDX-MS reveals pH and temperature-responsive regions on AAV capsids and the structural basis for DNA release.

作者信息

Ye Xiang, Hu Mengqi, Hu Yunli, Qiu Haibo, Li Ning

机构信息

Regeneron Pharmaceuticals Inc., Tarrytown, NY, 10591-6707, USA.

出版信息

Gene Ther. 2025 May 9. doi: 10.1038/s41434-025-00539-4.

DOI:10.1038/s41434-025-00539-4
PMID:40346287
Abstract

Recombinant adeno-associated viruses (AAVs) have become increasingly popular as gene therapy vectors in recent years. Like all viruses, AAVs undergo dynamic structural changes in response to varying temperature and pH conditions. However, the specific capsid regions involved in these processes remain unknown. In this study, we employed Hydrogen-Deuterium Exchange Mass Spectrometry (HDX-MS) to investigate the impact of pH and temperature on the structure and conformational dynamics of AAV capsids. Our analysis identified specific regions of the capsid that are sensitive to these environmental changes. Additionally, our data elucidated the structural basis for DNA uncoating or leakage triggered by low pH or high temperature. Detailed structural characterization of AAVs by HDX-MS in this study deepens our understanding of viral capsid conformational dynamics and stability in AAV transduction and manufacturing and storage conditions, paving the way for formulation development and next-generation capsid engineering.

摘要

近年来,重组腺相关病毒(AAV)作为基因治疗载体越来越受欢迎。与所有病毒一样,AAV会根据不同的温度和pH条件发生动态结构变化。然而,参与这些过程的特定衣壳区域仍然未知。在本研究中,我们采用氢-氘交换质谱(HDX-MS)来研究pH和温度对AAV衣壳结构和构象动力学的影响。我们的分析确定了衣壳中对这些环境变化敏感的特定区域。此外,我们的数据阐明了低pH或高温引发的DNA脱壳或泄漏的结构基础。本研究通过HDX-MS对AAV进行详细的结构表征,加深了我们对AAV转导、制造和储存条件下病毒衣壳构象动力学和稳定性的理解,为制剂开发和下一代衣壳工程铺平了道路。

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本文引用的文献

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Anal Chem. 2024 Oct 22;96(42):17037-17046. doi: 10.1021/acs.analchem.4c05229. Epub 2024 Oct 10.
2
Ligand-induced conformational changes in the β1-adrenergic receptor revealed by hydrogen-deuterium exchange mass spectrometry.配体诱导β1-肾上腺素能受体构象变化的氢氘交换质谱研究。
Nat Commun. 2024 Oct 18;15(1):8993. doi: 10.1038/s41467-024-53161-0.
3
Distinct chemical degradation pathways of AAV1 and AAV8 under thermal stress conditions revealed by analytical anion exchange chromatography and LC-MS-based peptide mapping.
分析型阴离子交换色谱和基于 LC-MS 的肽图分析揭示热应激条件下 AAV1 和 AAV8 的不同化学降解途径。
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Probe capsid structure stability and dynamics of adeno-associated virus as an important viral vector for gene therapy by hydrogen-deuterium exchange-mass spectrometry.通过氢氘交换-质谱法研究腺相关病毒作为基因治疗的重要病毒载体的探针衣壳结构稳定性和动力学。
Protein Sci. 2024 Jul;33(7):e5074. doi: 10.1002/pro.5074.
5
DNA Released by Adeno-Associated Virus Strongly Alters Capsid Aggregation Kinetics in a Physiological Solution.腺相关病毒释放的 DNA 强烈改变生理溶液中衣壳聚集动力学。
Biomacromolecules. 2024 May 13;25(5):2890-2901. doi: 10.1021/acs.biomac.4c00027. Epub 2024 Apr 29.
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A simple and sensitive differential digestion method to analyze adeno-associated virus residual host cell proteins by LC-MS.通过 LC-MS 分析腺相关病毒残余宿主细胞蛋白的简单灵敏的差消化方法。
J Pharm Biomed Anal. 2024 May 15;242:116009. doi: 10.1016/j.jpba.2024.116009. Epub 2024 Feb 6.
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