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独特分子检测法(UMA):一种用于多发性骨髓瘤高效、全面基因组分析和风险分层的新一代测序靶向检测板。

Unique molecular assay (UMA): a next-generation sequencing targeted panel for efficient and comprehensive genomic profiling and risk stratification of multiple myeloma.

作者信息

Poletti Andrea, Taurisano Barbara, Mazzocchetti Gaia, Lionetti Marta, Martello Marina, Vuong Viola Meixian, Solli Vincenza, Marzocchi Giulia, Maeda Akihiro, Vigliotta Ilaria, Borsi Enrica, Armuzzi Silvia, Pistis Ignazia, Marella Alessio, Fabris Sonia, Tacchetti Paola, Mancuso Katia, Rizzello Ilaria, Pantani Lucia, Testoni Nicoletta, Cavo Michele, Zamagni Elena, Bolli Niccolò, Terragna Carolina

机构信息

IRCCS Azienda Ospedaliero-Universitaria di Bologna, Istituto di Ematologia "Seràgnoli", Bologna, Italy; Dipartimento di Scienze Mediche e Chirurgiche, Università di Bologna, Bologna.

FABIT-Department of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy; Computational and Chemical Biology, Italian Institute of Technology (IIT), CMP3VdA, Aosta.

出版信息

Haematologica. 2025 May 15. doi: 10.3324/haematol.2025.287559.

Abstract

Multiple myeloma (MM) is characterized by genetic abnormalities in plasma cells, requiring precise genomic characterization for effective risk stratification and treatment. This study presents the Unique Molecular Assay (UMA) panel, a targeted DNA-sequencing approach designed to capture critical genomic aberrations in MM, including canonical immunoglobulin heavy chain translocations (t-IgH), copy number alterations (CNAs), and mutations in 82 genes. The UMA panel is the first MM sequencing panel validated against traditional methods like FISH and SNP-arrays across two laboratories for clinical-grade accuracy and reproducibility. The study included 150 patients whose DNA samples were analyzed using the UMA panel, achieving a median coverage of 233X with a requirement of ≥4 million reads per sample. The UMA panel demonstrated high concordance with FISH in detecting both CNAs and t-IgH, achieving a balanced accuracy >93%. Moreover, inter-laboratory validation confirmed the robustness and reliability of the panel on genomic alterations calls. Importantly, UMA panel enabled precise risk stratification based on the R2-ISS staging system, identifying high-risk features such as TP53 mutations and genome-wide CNAs. This comprehensive and cost-effective genomic profiling tool supports clinical decision-making and supports personalized treatment strategies in MM. The validated performance and scalability of the UMA panel suggest its potential to complement traditional diagnostic methods, offering detailed insights into the genomic landscape of MM.

摘要

多发性骨髓瘤(MM)的特征是浆细胞存在基因异常,需要精确的基因组特征分析以进行有效的风险分层和治疗。本研究介绍了独特分子检测(UMA)面板,这是一种靶向DNA测序方法,旨在捕获MM中的关键基因组畸变,包括典型免疫球蛋白重链易位(t-IgH)、拷贝数改变(CNA)以及82个基因中的突变。UMA面板是首个针对临床级准确性和可重复性,在两个实验室中对照FISH和SNP阵列等传统方法进行验证的MM测序面板。该研究纳入了150例患者,其DNA样本使用UMA面板进行分析,每个样本的中位覆盖度达到233倍,要求每个样本至少有400万条读数。UMA面板在检测CNA和t-IgH方面与FISH显示出高度一致性,平衡准确率超过93%。此外,实验室间验证证实了该面板在基因组改变检测方面的稳健性和可靠性。重要的是,UMA面板能够基于R2-ISS分期系统进行精确的风险分层,识别出如TP53突变和全基因组CNA等高风险特征。这种全面且具有成本效益的基因组分析工具支持临床决策,并支持MM的个性化治疗策略。UMA面板经过验证的性能和可扩展性表明其有潜力补充传统诊断方法,为MM的基因组格局提供详细见解。

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