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探索与GRIN相关的神经发育障碍中的基因-表型关系。

Exploring gene-phenotype relationships in GRIN-related neurodevelopmental disorders.

作者信息

Cha Jong Ho, Kim Jee Min, Yun Hee-Jeong, Chin Hyungjin, Kim Hye Jin, Kim Woojoong, Kim Soo Yeon, Lim Byung Chan, Kim Ki Joong, Lee Seungbok, Chae Jong-Hee

机构信息

Department of Pediatrics, Seoul National University College of Medicine, Seoul National University Children's Hospital, Seoul, South Korea.

Department of Genomic Medicine, Seoul National University Hospital, Seoul, South Korea.

出版信息

NPJ Genom Med. 2025 May 15;10(1):40. doi: 10.1038/s41525-025-00499-z.

DOI:10.1038/s41525-025-00499-z
PMID:40374652
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12081769/
Abstract

The GRIN family is implicated in neurological disorders, such as global developmental delay (GDD) and epilepsy. We reviewed 31 patients with GRIN-related neurodevelopmental disorders at Seoul National University Hospital; all exhibited profound GDD, with 58.1% unable to walk independently and 74.2% unable to speak meaningful words. In a pooled analysis with the GRIN portal data ( https://grin-portal.broadinstitute.org/ ), patients with missense or in-frame variants had significantly higher rates of profound GDD (74.3% vs. 30.4%, p < 0.001) and movement disorders (69.0% vs. 41.4%, p < 0.01) than those with protein-truncating variants. Furthermore, missense or in-frame variants in the M3 and M4 helices of the transmembrane domain were significantly associated with profound GDD (M3 helix: adjusted odds ratio [aOR] 8.48; 95% confidence interval [CI] 2.79-25.76; M4 helix: aOR 3.14; 95% CI 1.39-7.09) compared to those in other domains. Our findings highlight the importance of detailed variant characterization to inform personalized treatment strategies.

摘要

GRIN家族与神经疾病有关,如全面发育迟缓(GDD)和癫痫。我们回顾了首尔国立大学医院31例与GRIN相关的神经发育障碍患者;所有患者均表现出严重的全面发育迟缓,58.1%的患者无法独立行走,74.2%的患者无法说出有意义的词语。在与GRIN门户数据(https://grin-portal.broadinstitute.org/)的汇总分析中,错义或框内变异患者的严重全面发育迟缓(74.3%对30.4%,p<0.001)和运动障碍(69.0%对41.4%,p<0.01)发生率显著高于蛋白质截短变异患者。此外,与其他结构域相比,跨膜结构域M3和M4螺旋中的错义或框内变异与严重全面发育迟缓显著相关(M3螺旋:调整优势比[aOR]8.48;95%置信区间[CI]2.79-25.76;M4螺旋:aOR 3.14;95%CI 1.39-7.09)。我们的研究结果强调了详细变异特征分析对制定个性化治疗策略的重要性。

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1
Exploring gene-phenotype relationships in GRIN-related neurodevelopmental disorders.探索与GRIN相关的神经发育障碍中的基因-表型关系。
NPJ Genom Med. 2025 May 15;10(1):40. doi: 10.1038/s41525-025-00499-z.
2
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本文引用的文献

1
Disease-Associated Variants in GRIN1, GRIN2A and GRIN2B genes: Insights into NMDA Receptor Structure, Function, and Pathophysiology.GRIN1、GRIN2A 和 GRIN2B 基因中的疾病相关变异:对 NMDA 受体结构、功能和病理生理学的深入了解。
Physiol Res. 2024 May 31;73(Suppl 1):S413-S434. doi: 10.33549/physiolres.935346.
2
De novo GRIN variants in M3 helix associated with neurological disorders control channel gating of NMDA receptor.与神经障碍相关的 M3 螺旋中新发的 GRIN 变异体控制 NMDA 受体的通道门控。
Cell Mol Life Sci. 2024 Mar 28;81(1):153. doi: 10.1007/s00018-023-05069-z.
3
TNNT1 myopathy with novel compound heterozygous mutations.
伴有新型复合杂合突变的肌钙蛋白T1肌病
Neuromuscul Disord. 2022 Feb;32(2):176-184. doi: 10.1016/j.nmd.2021.12.003. Epub 2021 Dec 16.
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Analysis of M4 Transmembrane Segments in NMDA Receptor Function: A Negative Allosteric Modulatory Site at the GluN1 M4 is Determining the Efficiency of Neurosteroid Modulation.N-甲基-D-天冬氨酸受体功能中M4跨膜片段的分析:GluN1 M4处的负性变构调节位点决定神经甾体调节的效率。
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Clinical and therapeutic significance of genetic variation in the GRIN gene family encoding NMDARs.GRIN 基因家族编码的 NMDAR 中遗传变异的临床和治疗意义。
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Ann Clin Transl Neurol. 2021 Jul;8(7):1480-1494. doi: 10.1002/acn3.51406. Epub 2021 Jul 6.
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St. Jude Cloud: A Pediatric Cancer Genomic Data-Sharing Ecosystem.圣裘德云:儿科癌症基因组数据共享生态系统。
Cancer Discov. 2021 May;11(5):1082-1099. doi: 10.1158/2159-8290.CD-20-1230. Epub 2021 Jan 6.
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GRIN database: A unified and manually curated repertoire of GRIN variants.GRIN数据库:GRIN变异体的统一且经人工整理的汇总库。
Hum Mutat. 2021 Jan;42(1):8-18. doi: 10.1002/humu.24141. Epub 2020 Nov 30.
9
Disease-associated GRIN protein truncating variants trigger NMDA receptor loss-of-function.与疾病相关的 GRIN 蛋白截断变异可引发 NMDA 受体功能丧失。
Hum Mol Genet. 2021 Feb 25;29(24):3859-3871. doi: 10.1093/hmg/ddaa220.
10
The mutational constraint spectrum quantified from variation in 141,456 humans.从 141456 名人类个体的变异中量化的突变约束谱。
Nature. 2020 May;581(7809):434-443. doi: 10.1038/s41586-020-2308-7. Epub 2020 May 27.