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瞬时受体电位香草酸亚型3五聚体的结构动力学与通透性

Structural dynamics and permeability of the TRPV3 pentamer.

作者信息

Lansky Shifra, Wang Zhaokun, Clarke Oliver B, Chipot Christophe, Scheuring Simon

机构信息

Department of Anesthesiology, Weill Cornell Medicine, New York, NY, USA.

Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot, Israel.

出版信息

Nat Commun. 2025 May 15;16(1):4520. doi: 10.1038/s41467-025-59798-9.

Abstract

TRPV3 belongs to the large superfamily of tetrameric transient receptor potential (TRP) ion channels. Recently, using high-speed atomic force microscopy (HS-AFM), we discovered a rare and transient pentameric state for TRPV3 that is in equilibrium with the tetrameric state, and, using cryo-EM, we solved a low-resolution structure of the TRPV3 pentamer, in which, however, many residues were unresolved. Here, we present a higher resolution and more complete structure of the pentamer, revealing a domain-swapped architecture, a collapsed vanilloid binding site, and a large pore. Molecular dynamics simulations and potential of mean force calculations of the pentamer establish high protein dynamics and permeability to large cations. Subunit interface analysis, together with thermal denaturation experiments, led us to propose a molecular mechanism of the tetramer-to-pentamer transition, backed experimentally by HS-AFM observations. Collectively, our data demonstrate that the TRPV3 pentamer is in a hyper-activated state with unique, highly permissive permeation properties.

摘要

TRPV3属于四聚体瞬时受体电位(TRP)离子通道的大型超家族。最近,我们利用高速原子力显微镜(HS-AFM)发现了TRPV3一种罕见的瞬时五聚体状态,它与四聚体状态处于平衡,并且利用冷冻电镜(cryo-EM)解析了TRPV3五聚体的低分辨率结构,然而其中许多残基未解析。在此,我们展示了五聚体更高分辨率且更完整的结构,揭示了一种结构域交换架构、一个塌陷的香草酸结合位点和一个大孔。五聚体的分子动力学模拟和平均力势计算确定了高蛋白质动力学以及对大阳离子的通透性。亚基界面分析以及热变性实验使我们提出了从四聚体到五聚体转变的分子机制,并得到了HS-AFM观察结果的实验支持。总体而言,我们的数据表明TRPV3五聚体处于一种具有独特、高度允许通透特性的超激活状态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2772/12081643/949c808cc938/41467_2025_59798_Fig1_HTML.jpg

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