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一种5-磺酰基硫脲嘧啶衍生物拮抗剂在化学引诱素受体CMKLR1和GPR1上的相似结合模式

Similar Binding Mode of a 5-Sulfonylthiouracil Derivative Antagonist at Chemerin Receptors CMKLR1 and GPR1.

作者信息

Schermeng Tina, Fürll Alexander, Liessmann Fabian, von Bredow Lukas, Stichel Jan, Weaver C David, Tretbar Maik, Meiler Jens, Beck-Sickinger Annette G

机构信息

Institute of Biochemistry, Leipzig University, Leipzig 04103, Germany.

Institute for Drug Discovery, Leipzig University, Leipzig 04103, Germany.

出版信息

J Med Chem. 2025 Jun 12;68(11):11149-11173. doi: 10.1021/acs.jmedchem.5c00135. Epub 2025 May 16.

Abstract

Several studies have linked chemerin/chemokine-like receptor 1 (CMKLR1) to inflammation, leukocyte recruitment, and obesity. Reduced cellular activation may reduce inflammation in adipose tissues. High-throughput screening identified a novel antagonist (VU0514009), which was optimized to compound as a full and competitive antagonist (IC = 37 μM). Mutagenesis studies elucidated relevant interactions of compound at CMKLR1 residues Y6.51 and L7.35 as well as F7.31, S7.32, and T7.39 forming the binding pocket. Based on active CMKLR1/chemerin-9 structures and the inactive AlphaFold model, in silico docking was performed in the inactive model, with compound most likely binding orthosterically. Considering the sequence similarity of CMKLR1 and GPR1, compound was docked to GPR1, indicating a similar binding. At GPR1, compound showed a slightly lower effect on chemerin-9-mediated arrestin recruitment and internalization.

摘要

多项研究已将chemerin/趋化因子样受体1(CMKLR1)与炎症、白细胞募集和肥胖联系起来。细胞活化的降低可能会减轻脂肪组织中的炎症。高通量筛选鉴定出一种新型拮抗剂(VU0514009),该拮抗剂经优化后成为化合物,作为一种完全竞争性拮抗剂(IC = 37 μM)。诱变研究阐明了化合物在CMKLR1残基Y6.51和L7.35以及形成结合口袋的F7.31、S7.32和T7.39处的相关相互作用。基于活性CMKLR1/chemerin-9结构和非活性AlphaFold模型,在非活性模型中进行了计算机对接,化合物最有可能以正构方式结合。考虑到CMKLR1和GPR1的序列相似性,将化合物对接至GPR1,显示出类似的结合情况。在GPR1处,化合物对chemerin-9介导的抑制蛋白募集和内化的作用略低。

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