文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

成年灵长类动物新皮层的单细胞RNA测序揭示了神经可塑性的调控动态。

Single-cell RNA sequencing of adult primate neocortex reveals the regulatory dynamics of neural plasticity.

作者信息

Zhang Chi, Xie Zihong, Wang Ningli

机构信息

Beijing Tongren Eye Center, Beijing Tongren Hospital, Capital Medical University Beijing 100730, China.

State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University Guangzhou 510060, Guangdong, China.

出版信息

Am J Transl Res. 2025 Apr 15;17(4):2562-2576. doi: 10.62347/ZEOR5569. eCollection 2025.


DOI:10.62347/ZEOR5569
PMID:40385068
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12082558/
Abstract

OBJECTIVES: To investigate gene expression dynamics in adult primate neocortex and elucidate the molecular basis of these capabilities. METHODS: Whole-cell transcriptome data from primary visual cortex (V1) of cynomolgus monkeys were analyzed, focusing on inhibitory neurons derived from the medial ganglionic eminence. Using RNA velocity and scVelo algorithms, we investigated subtle gene expression shifts, identified key driver genes, and conducted functional enrichment analysis. RESULTS: Our analysis revealed that somatostatin ()+ neurons are generated prior to parvalbumin ()+ neurons, with gene expression trajectories resembling those observed in developing animals. However, certain well-established + and + neurons, such as long-projecting + chondrolectin ()+ neurons and + unc-5 netrin receptor B ()+ neurons, do not share the same lineage, suggesting distinct regulatory programs. Furthermore, we identified a set of genes strongly correlated with these trajectories, including dihydropyrimidinase like 3 (), osteocrin (), smoothelin (), meis homeobox 2 (), chromodomain helicase DNA binding protein 3 (), and chromodomain helicase DNA binding protein 5 (). Functional enrichment analysis suggested that these genes are associated with neural plasticity and axon growth. CONCLUSIONS: This study provides novel insights into the gene expression dynamics of the primate neocortex. Genes involved in neuronal development and plasticity may underlie the advanced information-processing capabilities in primates.

摘要

目的:研究成年灵长类动物新皮质中的基因表达动态,并阐明这些能力的分子基础。 方法:分析了食蟹猴初级视皮层(V1)的全细胞转录组数据,重点关注源自内侧神经节隆起的抑制性神经元。使用RNA速度和scVelo算法,我们研究了细微的基因表达变化,确定了关键驱动基因,并进行了功能富集分析。 结果:我们的分析表明,生长抑素(SST)+神经元在小白蛋白(PV)+神经元之前产生,其基因表达轨迹与在发育中的动物中观察到的相似。然而,某些成熟的SST+和PV+神经元,如长投射SST+软骨凝集素(CHODL)+神经元和PV+unc-5神经纤毛蛋白受体B(UNC5B)+神经元,并不具有相同的谱系,这表明存在不同的调控程序。此外,我们确定了一组与这些轨迹密切相关的基因,包括二氢嘧啶酶样3(DPYSL3)、骨分泌素(OSTN)、平滑肌肌动蛋白(SMO)、Meis同源盒2(MEIS2)、染色质结构域解旋酶DNA结合蛋白3(CHD3)和染色质结构域解旋酶DNA结合蛋白5(CHD5)。功能富集分析表明,这些基因与神经可塑性和轴突生长相关。 结论:本研究为灵长类动物新皮质的基因表达动态提供了新的见解。参与神经元发育和可塑性的基因可能是灵长类动物先进信息处理能力的基础。

相似文献

[1]
Single-cell RNA sequencing of adult primate neocortex reveals the regulatory dynamics of neural plasticity.

Am J Transl Res. 2025-4-15

[2]
Integrative RNA profiling of TBEV-infected neurons and astrocytes reveals potential pathogenic effectors.

Comput Struct Biotechnol J. 2022-5-30

[3]
Reliable Sensory Processing in Mouse Visual Cortex through Cooperative Interactions between Somatostatin and Parvalbumin Interneurons.

J Neurosci. 2021-10-20

[4]
Integration of ATAC-seq and RNA-seq identifies human alpha cell and beta cell signature genes.

Mol Metab. 2016-1-11

[5]
Transcriptional Regulation of Cortical Interneuron Development

2024

[6]
Activation of Somatostatin Interneurons by Nicotinic Modulator Lypd6 Enhances Plasticity and Functional Recovery in the Adult Mouse Visual Cortex.

J Neurosci. 2020-5-28

[7]
Evolution of Osteocrin as an activity-regulated factor in the primate brain.

Nature. 2016-11-10

[8]
Transcriptomic pathology of neocortical microcircuit cell types across psychiatric disorders.

Mol Psychiatry. 2025-3

[9]
Caudal Ganglionic Eminence Precursor Transplants Disperse and Integrate as Lineage-Specific Interneurons but Do Not Induce Cortical Plasticity.

Cell Rep. 2016-8-2

[10]
Primate Neurons Flex Their Musclin.

Neuron. 2016-11-23

引用本文的文献

[1]
Robust Production of Parvalbumin Interneurons and Fast-Spiking Neurons from Human Medial Ganglionic Eminence Organoids.

bioRxiv. 2025-7-4

本文引用的文献

[1]
The neuronal transcription factor MEIS2 is a calpain-2 protease target.

J Cell Sci. 2024-2-15

[2]
Multimodal Nature of the Single-cell Primate Brain Atlas: Morphology, Transcriptome, Electrophysiology, and Connectivity.

Neurosci Bull. 2024-4

[3]
A primate nigrostriatal atlas of neuronal vulnerability and resilience in a model of Parkinson's disease.

Nat Commun. 2023-11-18

[4]
Talin2 and KANK2 functionally interact to regulate microtubule dynamics, paclitaxel sensitivity and cell migration in the MDA-MB-435S melanoma cell line.

Cell Mol Biol Lett. 2023-7-17

[5]
Identification of visual cortex cell types and species differences using single-cell RNA sequencing.

Nat Commun. 2022-11-12

[6]
Understanding Protein Protocadherin-19 (PCDH19) Syndrome: A Literature Review of the Pathophysiology.

Cureus. 2022-6-10

[7]
Single-cell transcriptomics of adult macaque hippocampus reveals neural precursor cell populations.

Nat Neurosci. 2022-6

[8]
Human neocortical expansion involves glutamatergic neuron diversification.

Nature. 2021-10

[9]
Epigenomic diversity of cortical projection neurons in the mouse brain.

Nature. 2021-10

[10]
The Gene Ontology resource: enriching a GOld mine.

Nucleic Acids Res. 2021-1-8

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索