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1
A direct computational assessment of vinculin-actin unbinding kinetics reveals catch-bonding behavior.
Proc Natl Acad Sci U S A. 2025 May 27;122(21):e2425982122. doi: 10.1073/pnas.2425982122. Epub 2025 May 21.
2
A direct computational assessment of vinculin-actin unbinding kinetics reveals catch bonding behavior.
bioRxiv. 2024 Oct 13:2024.10.10.617580. doi: 10.1101/2024.10.10.617580.
3
Vinculin forms a directionally asymmetric catch bond with F-actin.
Science. 2017 Aug 18;357(6352):703-706. doi: 10.1126/science.aan2556.
4
Vinculin-dependent actin bundling regulates cell migration and traction forces.
Biochem J. 2015 Feb 1;465(3):383-93. doi: 10.1042/BJ20140872.
5
Molecular basis and cellular functions of vinculin-actin directional catch bonding.
Nat Commun. 2023 Dec 14;14(1):8300. doi: 10.1038/s41467-023-43779-x.
8
Structural basis of αE-catenin-F-actin catch bond behavior.
Elife. 2020 Sep 11;9:e60878. doi: 10.7554/eLife.60878.
9
Molecular Simulations Suggest a Force-Dependent Mechanism of Vinculin Activation.
Biophys J. 2017 Oct 17;113(8):1697-1710. doi: 10.1016/j.bpj.2017.08.037.
10
Detection of fluorescent protein mechanical switching in cellulo.
Cell Rep Methods. 2024 Jul 15;4(7):100815. doi: 10.1016/j.crmeth.2024.100815. Epub 2024 Jul 9.

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1
Load-based divergence in the dynamic allostery of two TCRs recognizing the same pMHC.
bioRxiv. 2025 Mar 3:2024.10.16.618634. doi: 10.1101/2024.10.16.618634.

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1
PLUMED Tutorials: A collaborative, community-driven learning ecosystem.
J Chem Phys. 2025 Mar 7;162(9). doi: 10.1063/5.0251501.
2
Molecular dynamics simulations reveal how vinculin refolds partially unfolded talin rod helices to stabilize them against mechanical force.
PLoS Comput Biol. 2024 Aug 7;20(8):e1012341. doi: 10.1371/journal.pcbi.1012341. eCollection 2024 Aug.
3
Good Rates From Bad Coordinates: The Exponential Average Time-dependent Rate Approach.
J Chem Theory Comput. 2024 Jul 23;20(14):5901-5912. doi: 10.1021/acs.jctc.4c00425. Epub 2024 Jul 2.
4
Quantifying Unbiased Conformational Ensembles from Biased Simulations Using ShapeGMM.
J Chem Theory Comput. 2024 May 14;20(9):3492-3502. doi: 10.1021/acs.jctc.4c00223. Epub 2024 Apr 25.
5
Enhanced Sampling with Machine Learning.
Annu Rev Phys Chem. 2024 Jun;75(1):347-370. doi: 10.1146/annurev-physchem-083122-125941. Epub 2024 Jun 14.
6
Molecular simulation approaches to probing the effects of mechanical forces in the actin cytoskeleton.
Cytoskeleton (Hoboken). 2024 Aug;81(8):318-327. doi: 10.1002/cm.21837. Epub 2024 Feb 9.
7
Topology of molecular deformations induces triphasic catch bonding in selectin-ligand bonds.
Proc Natl Acad Sci U S A. 2024 Feb 6;121(6):e2315866121. doi: 10.1073/pnas.2315866121. Epub 2024 Jan 31.
8
Improved Prediction of Molecular Response to Pulling by Combining Force Tempering with Replica Exchange Methods.
J Phys Chem B. 2024 Jan 25;128(3):706-715. doi: 10.1021/acs.jpcb.3c07081. Epub 2024 Jan 17.
9
Molecular basis and cellular functions of vinculin-actin directional catch bonding.
Nat Commun. 2023 Dec 14;14(1):8300. doi: 10.1038/s41467-023-43779-x.
10
Allosteric activation of vinculin by talin.
Nat Commun. 2023 Jul 18;14(1):4311. doi: 10.1038/s41467-023-39646-4.

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