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分子动力学模拟揭示了 vinculin 如何使部分展开的 talin 杆螺旋重新折叠,从而稳定它们免受机械力的影响。

Molecular dynamics simulations reveal how vinculin refolds partially unfolded talin rod helices to stabilize them against mechanical force.

机构信息

Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland.

School of Biosciences, University of Kent, Canterbury, United Kingdom.

出版信息

PLoS Comput Biol. 2024 Aug 7;20(8):e1012341. doi: 10.1371/journal.pcbi.1012341. eCollection 2024 Aug.

Abstract

Vinculin binds to specific sites of mechanically unfolded talin rod domains to reinforce the coupling of the cell's exterior to its force generation machinery. Force-dependent vinculin-talin complexation and dissociation was previously observed as contraction or extension of the unfolded talin domains respectively using magnetic tweezers. However, the structural mechanism underlying vinculin recognition of unfolded vinculin binding sites (VBSs) in talin remains unknown. Using molecular dynamics simulations, we demonstrate that a VBS dynamically refolds under force, and that vinculin can recognize and bind to partially unfolded VBS states. Vinculin binding enables refolding of the mechanically strained VBS and stabilizes its folded α-helical conformation, providing resistance against mechanical stress. Together, these results provide an understanding of a recognition mechanism of proteins unfolded by force and insight into the initial moments of how vinculin binds unfolded talin rod domains during the assembly of this mechanosensing meshwork.

摘要

衔接蛋白结合到机械展开的桩蛋白杆状结构域的特定部位,以增强细胞外部与产生力的机械装置之间的连接。使用磁镊观察到力依赖性衔接蛋白-桩蛋白复合物的形成和解离分别对应于展开的桩蛋白结构域的收缩和延伸。然而,衔接蛋白识别桩蛋白中展开的衔接蛋白结合位点(VBS)的结构机制尚不清楚。本研究使用分子动力学模拟表明,VBS 在力的作用下发生动态折叠,并且衔接蛋白可以识别和结合部分展开的 VBS 状态。衔接蛋白的结合使机械应变的 VBS 发生折叠,并稳定其折叠的 α-螺旋构象,从而抵抗机械应力。这些结果提供了一种对力诱导蛋白质展开的识别机制的理解,并深入了解了在这个机械传感网格的组装过程中,衔接蛋白如何结合展开的桩蛋白杆状结构域的初始时刻。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f24/11333002/ffe23be0d51d/pcbi.1012341.g001.jpg

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