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用于检测零售鸡肉中食源性病原体的鸟枪法宏基因组测序

Shotgun metagenomic sequencing for detection of foodborne pathogens in retail chicken.

作者信息

Punchihewage-Don Anuradha J, Hasan Nur A, Parveen Salina

机构信息

Food Microbiology and Safety Laboratory, Department of Agriculture, Food and Resource Sciences, University of Maryland Eastern Shore, Princess Anne, Maryland, USA.

EzBiome Inc., Gaithersburg, Maryland, USA.

出版信息

Microbiol Resour Announc. 2025 Jun 12;14(6):e0003325. doi: 10.1128/mra.00033-25. Epub 2025 May 22.

Abstract

We applied shotgun metagenomic sequencing to microbiomes from retail chicken processed using whole carcass enrichment and rinse methodologies to evaluate their effectiveness in detecting foodborne pathogens. The dataset has been made publicly available to facilitate future analysis of microbial diversity and pathogen presence across different sample processing methods.

摘要

我们将鸟枪法宏基因组测序应用于使用全胴体富集和冲洗方法处理的零售鸡肉微生物群落,以评估它们在检测食源性病原体方面的有效性。该数据集已公开提供,以促进未来对不同样品处理方法下微生物多样性和病原体存在情况的分析。

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