Novak Sadie X, Linsky Jacob M J, Knapp Kaitlyn J, Parks Susan E, Wiley David, Cusano Dana A
Chemistry Department, Syracuse University, Syracuse, New York, United States of America.
Moreton Bay Research Station, The University of Queensland, St. Lucia, Queensland, Australia.
PLoS One. 2025 May 23;20(5):e0323658. doi: 10.1371/journal.pone.0323658. eCollection 2025.
For many baleen whales, minimal sexual dimorphism means that sex cannot necessarily be reliably determined through observation alone. Suction cup tags deployed for behavioral studies of free-ranging whales sometimes retain exfoliated epidermal tissue from the tagged animal that can potentially be used for molecular genetic sexing. This study provides a protocol to recover and preserve skin from suction cup tags and compares the accuracy of resulting PCR-based sex determinations relative to independent data on individual sex. Skin samples (N = 43) were recovered from tags deployed on North Atlantic humpback and right whales of known sex. Of these, data were obtained from 21 tags deployed on 15 individuals. A PCR-based sex determination yielded correct results for 9 male and 11 female samples. One female was misidentified as male in one of two samples collected from the same tag, suggesting the potential for sexing error based on suction cup tag-derived tissue. The probability of accurate results given current information was estimated using Bayes theorem, with a female result estimated to be 100% reliable, and a male result estimated to be 91% reliable. The minimum DNA yield that resulted in a successful PCR run was 29 ng, however four samples with higher DNA yield did not. With further work, this protocol may increase the reliable data that can be collected as part of suction-cup tagging studies of cetaceans.
对于许多须鲸来说,最小的两性异形意味着仅通过观察不一定能可靠地确定性别。为自由游动的鲸鱼行为研究而部署的吸盘标签有时会保留来自被标记动物的脱落表皮组织,这些组织有可能用于分子遗传学性别鉴定。本研究提供了一种从吸盘标签中回收和保存皮肤的方案,并将基于聚合酶链式反应(PCR)的性别鉴定结果的准确性与个体性别的独立数据进行了比较。从部署在已知性别的北大西洋座头鲸和露脊鲸身上的标签中回收了皮肤样本(N = 43)。其中,从部署在15头个体身上的21个标签中获得了数据。基于PCR的性别鉴定对9个雄性样本和11个雌性样本产生了正确结果。从同一个标签采集的两个样本中,有一个雌性样本被误鉴定为雄性,这表明基于吸盘标签衍生组织进行性别鉴定存在出错的可能性。利用贝叶斯定理根据当前信息估计了得到准确结果的概率,估计雌性结果为100%可靠,雄性结果为91%可靠。成功进行PCR反应的最低DNA产量为29纳克,然而,有4个DNA产量较高的样本却没有成功。通过进一步的研究,该方案可能会增加作为鲸类动物吸盘标记研究一部分可收集到的可靠数据。