Zhang Jianchao, Chen Congli, Chen Xiao, Liao Kefan, Li Fengming, Song Xiaoxiao, Liu Chaowei, Su Ming-Yuan, Sun Huiyong, Hou Tingjun, Tan Chris Soon Heng, Fang Lijing, Rao Hai
Department of Biochemistry, School of Medicine, Southern University of Science and Technology, Shenzhen, China.
Guangdong Key Laboratory of Nanomedicine, CAS-HK Joint Lab of Biomaterials, Key Laboratory of Biomedical Imaging Science and System, Chinese Academy of Sciences, State Key Laboratory of Biomedical Imaging Science and System, Institute of Biomedicine and Biotechnology, Shenzhen Institute of Advanced Technology (SIAT), Chinese Academy of Sciences, Shenzhen, China.
Nat Commun. 2025 May 23;16(1):4794. doi: 10.1038/s41467-025-60107-7.
Proteolysis-targeting chimeras (PROTACs) present a potentially effective strategy against various diseases via selective proteolysis. How to increase the efficacy of PROTACs remains challenging. Here, we explore the necessity of the linker, which has been deemed as an integral part of heterobifunctional PROTACs. Adopting single amino acid-based degradation signals, we find that the linker is not a required feature of the PROTACs. Notably, the linker-free PROTAC, Pro-BA, exhibits superior efficacy over its linker-bearing counterparts in degrading EML4-ALK and inhibiting lung cancer cell growth, as Pro-BA induces a stronger interaction between the target and the E3 ubiquitin ligase. Pro-BA is a water-soluble, orally administered degrader that significantly inhibits the tumor growth in a xenograft mouse model. The broad applicability of this linker-free PROTAC strategy is further validated through the development of BCR-ABL degrader. Our study introduces a design paradigm for PROTACs, potentially facilitating the advancement of more efficient therapeutic degraders.
靶向蛋白水解嵌合体(PROTACs)通过选择性蛋白水解为对抗各种疾病提供了一种潜在的有效策略。如何提高PROTACs的疗效仍然具有挑战性。在此,我们探讨了连接子的必要性,连接子被认为是异双功能PROTACs的一个组成部分。采用基于单个氨基酸的降解信号,我们发现连接子并非PROTACs的必需特征。值得注意的是,无连接子的PROTAC(Pro-BA)在降解EML4-ALK和抑制肺癌细胞生长方面比其有连接子的对应物表现出更高的疗效,因为Pro-BA能诱导靶标与E3泛素连接酶之间产生更强的相互作用。Pro-BA是一种水溶性、口服给药的降解剂,能在异种移植小鼠模型中显著抑制肿瘤生长。通过开发BCR-ABL降解剂,进一步验证了这种无连接子PROTAC策略的广泛适用性。我们的研究引入了一种PROTACs的设计范式,可能有助于推动更高效治疗性降解剂的发展。