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使用随机微分方程模型估计合成肿瘤和体外肿瘤的治疗敏感性。

Estimating treatment sensitivity in synthetic and in vitro tumors using a random differential equation model.

作者信息

Meacham Natalie, Rutter Erica M

机构信息

Department of Applied Mathematics, University of California, Merced, Merced, CA, USA.

Health Sciences Research Institute, University of California, Merced, Merced, CA, USA.

出版信息

NPJ Syst Biol Appl. 2025 May 23;11(1):54. doi: 10.1038/s41540-025-00530-0.

Abstract

Resistance to treatment, which comes from the heterogeneity of cell types within tumors, is a leading cause of poor treatment outcomes in cancer patients. Previous mathematical work modeling cancer over time has neither emphasized the relationship between cell heterogeneity and treatment resistance nor depicted heterogeneity with sufficient nuance. To respond to the need to depict a wide range of resistance levels, we develop a random differential equation model of tumor growth. Random differential equations are differential equations in which the parameters are random variables. In the inverse problem, we aim to recover the sensitivity to treatment as a probability mass function. This allows us to observe what proportions of cells exist at different sensitivity levels. After validating the method with synthetic data, we apply it to monoclonal and mixture cell population data of isogenic Ba/F3 murine cell lines to uncover each tumor's levels of sensitivity to treatment as a probability mass function.

摘要

肿瘤内细胞类型的异质性导致的治疗抵抗是癌症患者治疗效果不佳的主要原因。以往对癌症随时间变化进行建模的数学研究既未强调细胞异质性与治疗抵抗之间的关系,也未对异质性进行足够细致的描述。为满足描述广泛耐药水平的需求,我们开发了一种肿瘤生长的随机微分方程模型。随机微分方程是参数为随机变量的微分方程。在反问题中,我们旨在将对治疗的敏感性恢复为概率质量函数。这使我们能够观察到不同敏感性水平下存在的细胞比例。在用合成数据验证该方法后,我们将其应用于同基因Ba/F3小鼠细胞系的单克隆和混合细胞群体数据,以将每个肿瘤对治疗的敏感性水平恢复为概率质量函数。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e07e/12102228/aa71f7349533/41540_2025_530_Fig1_HTML.jpg

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