• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于机器学习利用多种细胞死亡模式来解读软组织肉瘤的预后、免疫及免疫治疗反应。

Leveraging multiple cell-death patterns based on machine learning to decipher the prognosis, immune, and immune therapeutic response of soft tissue sarcoma.

作者信息

Liu Binfeng, He Shasha, Li Chenbei, Xiong Zijian, Li Zhaoqi, Feng Chengyao, Wang Hua, Tu Chao, Li Zhihong

机构信息

Department of Orthopaedics, The Second Xiangya Hospital, Central South University, Changsha, 410011, Hunan, China.

Hunan Key Laboratory of Tumor Models and Individualized Medicine, The Second Xiangya Hospital of Central South University, Changsha, 410011, Hunan, China.

出版信息

Discov Oncol. 2025 May 25;16(1):917. doi: 10.1007/s12672-025-02587-z.

DOI:10.1007/s12672-025-02587-z
PMID:40413669
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12104128/
Abstract

Soft tissue sarcomas (STS) imposes a substantial healthcare burden on society. The progression of these tumors is significantly influenced by diverse modes of programmed cell death (PCD), which can serve as valuable indicators for assessing prognosis and immune therapeutic response in STS. Nonetheless, the precise role of multiple cell death patterns in STS is yet to be clarified. We employed 96 machine-learning algorithm combination frameworks to identify novel cell death-related signatures (CDSigs) with the highest mean c-index, indicating their excellence. The independence test and comparison with previously published models further confirmed the stability and quality of these signatures for survival prediction in STS. The nomogram, comprising the cell death score (CDS) and clinical features, exhibited excellent predictive performance. Additionally, the CDSigs revealed associations with immune checkpoint genes and the immune microenvironment in STS. Furthermore, the results demonstrated that patients with lower CDS had the potential for greater benefit from immune therapeutic responses compared to those with higher CDS. Moreover, STS patients with low-risk scores exhibited heightened sensitivity to doxorubicin, axitinib, cisplatin, and camptothecin. Finally, the RT-qPCR results underscored significant differences in expression levels of several CDSigs genes between STS and normal cells. Overall, we comprehensively analyzed the multiple PCD in STS and established a novel CDSig for STS patients. This novel CDSig holds great promise in deciphering the prognosis, immune, and immune therapeutic response of STS.

摘要

软组织肉瘤(STS)给社会带来了沉重的医疗负担。这些肿瘤的进展受到多种程序性细胞死亡(PCD)模式的显著影响,这些模式可作为评估STS预后和免疫治疗反应的有价值指标。然而,多种细胞死亡模式在STS中的确切作用尚待阐明。我们采用了96种机器学习算法组合框架来识别具有最高平均c指数的新型细胞死亡相关特征(CDSigs),表明它们的卓越性。独立性测试以及与先前发表模型的比较进一步证实了这些特征在STS生存预测中的稳定性和质量。包含细胞死亡评分(CDS)和临床特征的列线图表现出优异的预测性能。此外,CDSigs揭示了与STS中免疫检查点基因和免疫微环境的关联。此外,结果表明,与CDS较高的患者相比,CDS较低的患者可能从免疫治疗反应中获益更大。此外,低风险评分的STS患者对阿霉素、阿西替尼、顺铂和喜树碱表现出更高的敏感性。最后,RT-qPCR结果强调了STS与正常细胞之间几种CDSigs基因表达水平的显著差异。总体而言,我们全面分析了STS中的多种PCD,并为STS患者建立了一种新型CDSig。这种新型CDSig在解读STS的预后、免疫和免疫治疗反应方面具有很大的前景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/38889b026ae0/12672_2025_2587_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/c2fe84406165/12672_2025_2587_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/64bed4a6c449/12672_2025_2587_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/335c4dc8fc80/12672_2025_2587_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/bf80e82ee752/12672_2025_2587_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/1ed664381861/12672_2025_2587_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/af91d93fb2f8/12672_2025_2587_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/1770413741e1/12672_2025_2587_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/295e8184386a/12672_2025_2587_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/38889b026ae0/12672_2025_2587_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/c2fe84406165/12672_2025_2587_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/64bed4a6c449/12672_2025_2587_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/335c4dc8fc80/12672_2025_2587_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/bf80e82ee752/12672_2025_2587_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/1ed664381861/12672_2025_2587_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/af91d93fb2f8/12672_2025_2587_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/1770413741e1/12672_2025_2587_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/295e8184386a/12672_2025_2587_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8471/12104128/38889b026ae0/12672_2025_2587_Fig9_HTML.jpg

相似文献

1
Leveraging multiple cell-death patterns based on machine learning to decipher the prognosis, immune, and immune therapeutic response of soft tissue sarcoma.基于机器学习利用多种细胞死亡模式来解读软组织肉瘤的预后、免疫及免疫治疗反应。
Discov Oncol. 2025 May 25;16(1):917. doi: 10.1007/s12672-025-02587-z.
2
Development of a prognostic Neutrophil Extracellular Traps related lncRNA signature for soft tissue sarcoma using machine learning.基于机器学习的软组织肉瘤预后性中性粒细胞胞外诱捕网相关长链非编码 RNA 标志物的建立。
Front Immunol. 2024 Jan 9;14:1321616. doi: 10.3389/fimmu.2023.1321616. eCollection 2023.
3
Molecular subtypes of lung adenocarcinoma patients for prognosis and therapeutic response prediction with machine learning on 13 programmed cell death patterns.基于 13 种程序性细胞死亡模式的机器学习对肺腺癌患者预后和治疗反应预测的分子亚型。
J Cancer Res Clin Oncol. 2023 Oct;149(13):11351-11368. doi: 10.1007/s00432-023-05000-w. Epub 2023 Jun 28.
4
T-cell infiltration and clonality correlate with programmed cell death protein 1 and programmed death-ligand 1 expression in patients with soft tissue sarcomas.T细胞浸润和克隆性与软组织肉瘤患者程序性细胞死亡蛋白1和程序性死亡配体1的表达相关。
Cancer. 2017 Sep 1;123(17):3291-3304. doi: 10.1002/cncr.30726. Epub 2017 May 2.
5
Integration analysis based on fatty acid metabolism robustly predicts prognosis, dissecting immunity microenvironment and aiding immunotherapy for soft tissue sarcoma.基于脂肪酸代谢的整合分析能有力地预测软组织肉瘤的预后、剖析免疫微环境并辅助免疫治疗。
Front Genet. 2023 Mar 30;14:1161791. doi: 10.3389/fgene.2023.1161791. eCollection 2023.
6
The cell death-related genes machine learning model for precise therapy and clinical drug selection in hepatocellular carcinoma.肝细胞癌精准治疗和临床药物选择的细胞死亡相关基因机器学习模型。
J Cell Mol Med. 2024 Apr;28(7):e18168. doi: 10.1111/jcmm.18168.
7
Comprehensive analysis of a novel cuproptosis-related lncRNA signature associated with prognosis and tumor matrix features to predict immunotherapy in soft tissue carcinoma.对一种与预后和肿瘤基质特征相关的新型铜死亡相关长链非编码RNA特征进行综合分析,以预测软组织癌的免疫治疗效果。
Front Genet. 2022 Dec 7;13:1063057. doi: 10.3389/fgene.2022.1063057. eCollection 2022.
8
Machine learning analysis identified NNMT as a potential therapeutic target for hepatocellular carcinoma based on PCD-related genes.机器学习分析基于与程序性细胞死亡(PCD)相关的基因,将NNMT确定为肝细胞癌的一个潜在治疗靶点。
Sci Rep. 2025 Mar 3;15(1):7494. doi: 10.1038/s41598-025-91625-5.
9
Comprehensive genomic analysis of primary bone sarcomas reveals different genetic patterns compared with soft tissue sarcomas.原发性骨肉瘤的综合基因组分析显示,与软组织肉瘤相比,其具有不同的遗传模式。
Front Oncol. 2023 Jul 21;13:1173275. doi: 10.3389/fonc.2023.1173275. eCollection 2023.
10
A programmed cell death-related model based on machine learning for predicting prognosis and immunotherapy responses in patients with lung adenocarcinoma.基于机器学习的程序性细胞死亡相关模型预测肺腺癌患者的预后和免疫治疗反应。
Front Immunol. 2023 Aug 21;14:1183230. doi: 10.3389/fimmu.2023.1183230. eCollection 2023.

本文引用的文献

1
EGR3 and estrone are involved in the tamoxifen resistance and progression of breast cancer.EGR3 和雌酮参与了乳腺癌的他莫昔芬耐药和进展。
J Cancer Res Clin Oncol. 2023 Dec;149(20):18103-18117. doi: 10.1007/s00432-023-05503-6. Epub 2023 Nov 24.
2
Integrative analysis of TROAP with molecular features, carcinogenesis, and related immune and pharmacogenomic characteristics in soft tissue sarcoma.软组织肉瘤中TROAP与分子特征、致癌作用及相关免疫和药物基因组学特征的综合分析
MedComm (2020). 2023 Sep 18;4(5):e369. doi: 10.1002/mco2.369. eCollection 2023 Oct.
3
Integration analysis based on fatty acid metabolism robustly predicts prognosis, dissecting immunity microenvironment and aiding immunotherapy for soft tissue sarcoma.
基于脂肪酸代谢的整合分析能有力地预测软组织肉瘤的预后、剖析免疫微环境并辅助免疫治疗。
Front Genet. 2023 Mar 30;14:1161791. doi: 10.3389/fgene.2023.1161791. eCollection 2023.
4
Combining multiple cell death pathway-related risk scores to develop neuroblastoma cell death signature.将多个细胞死亡途径相关风险评分相结合,开发神经母细胞瘤细胞死亡特征。
J Cancer Res Clin Oncol. 2023 Aug;149(9):6513-6526. doi: 10.1007/s00432-023-04605-5. Epub 2023 Feb 13.
5
Molecular characterization of immunogenic cell death indicates prognosis and tumor microenvironment infiltration in osteosarcoma.免疫原性细胞死亡的分子特征表明骨肉瘤的预后和肿瘤微环境浸润。
Front Immunol. 2022 Dec 9;13:1071636. doi: 10.3389/fimmu.2022.1071636. eCollection 2022.
6
Comprehensive analysis of a novel cuproptosis-related lncRNA signature associated with prognosis and tumor matrix features to predict immunotherapy in soft tissue carcinoma.对一种与预后和肿瘤基质特征相关的新型铜死亡相关长链非编码RNA特征进行综合分析,以预测软组织癌的免疫治疗效果。
Front Genet. 2022 Dec 7;13:1063057. doi: 10.3389/fgene.2022.1063057. eCollection 2022.
7
Identification of hub genes correlated with tumor-associated M1-like macrophage infiltration in soft tissue sarcomas.软组织肉瘤中与肿瘤相关的M1样巨噬细胞浸润相关的枢纽基因的鉴定。
Front Genet. 2022 Dec 6;13:999966. doi: 10.3389/fgene.2022.999966. eCollection 2022.
8
The regulatory role and therapeutic application of pyroptosis in musculoskeletal diseases.细胞焦亡在肌肉骨骼疾病中的调节作用及治疗应用
Cell Death Discov. 2022 Dec 15;8(1):492. doi: 10.1038/s41420-022-01282-0.
9
Leveraging diverse cell-death patterns to predict the prognosis and drug sensitivity of triple-negative breast cancer patients after surgery.利用多种细胞死亡模式预测手术后三阴性乳腺癌患者的预后和药物敏感性。
Int J Surg. 2022 Nov;107:106936. doi: 10.1016/j.ijsu.2022.106936. Epub 2022 Sep 20.
10
Identification of ACSF gene family as therapeutic targets and immune-associated biomarkers in hepatocellular carcinoma.鉴定 ACSF 基因家族作为肝细胞癌的治疗靶点和免疫相关生物标志物。
Aging (Albany NY). 2022 Oct 4;14(19):7926-7940. doi: 10.18632/aging.204323.