Liberman Sveta, Bobot Lea, Ben Daniel Hadar T, Major Dan T, Fischer Bilha
Department of Chemistry, Bar Ilan University, Ramat Gan, 5290002, Israel.
Chemistry. 2025 Jun 26;31(36):e202501228. doi: 10.1002/chem.202501228. Epub 2025 Jun 1.
7-membered cyclic nucleotides have remained unknown despite the natural abundance of their 5- and 6-membered counterparts. Here, we report the first synthesis of 2',3'-cyclic nucleosides (tetrathio)diphosphonate (2',3'-cNTDPs) by a rapid one-step, regioselective, and protection-free reaction of U, A, C, I, and G, with methylene-bis(1,3,2-dithia-phospholane-2-sulfide) (DTPS). The reaction proceeds instantaneously, even at -35 °C, resulting in the quantitative conversion of methylene-bis-DTPS. Density functional theory (DFT) calculations of ∆G confirm the synthetic feasibility and regioselectivity, attributing the efficiency to strain release in DTPS rings and entropic gain from thiirane elimination. The resulting 2',3'-cNTDPs exhibited remarkable hydrolytic stability and greater solution structural rigidity than free nucleosides.
尽管五元环和六元环的环状核苷酸在自然界中广泛存在,但七元环的环状核苷酸却一直不为人知。在此,我们报道了通过尿苷(U)、腺苷(A)、胞苷(C)、肌苷(I)和鸟苷(G)与亚甲基双(1,3,2-二硫代磷杂环戊烷-2-硫化物)(DTPS)进行快速一步、区域选择性且无需保护的反应,首次合成了2',3'-环核苷(四硫代)二磷酸酯(2',3'-cNTDPs)。该反应即使在-35°C时也能瞬间进行,实现了亚甲基双-DTPS的定量转化。密度泛函理论(DFT)对∆G的计算证实了合成的可行性和区域选择性,将其效率归因于DTPS环中的应变释放以及硫杂环丙烷消除带来的熵增。所得到的2',3'-cNTDPs表现出显著的水解稳定性,并且比游离核苷具有更高的溶液结构刚性。