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胃癌发生级联反应中选定的Alu甲基化水平。

Selected Alu methylation levels in the gastric carcinogenesis cascade.

作者信息

Meevassana Jiraroch, Vongsuly Chawisa Wanda, Nakbua Tanchanok, Kamolratanakul Supitcha, Thitiwanichpiwong Pichaya, Bin-Alee Fardeela, Keelawat Somboon, Kitkumthorn Nakarin

机构信息

Center of Excellence in Burn and Wound Care, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand.

Department of Clinical Tropical Medicine, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand.

出版信息

PeerJ. 2025 May 20;13:e19485. doi: 10.7717/peerj.19485. eCollection 2025.

DOI:10.7717/peerj.19485
PMID:40416611
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12101442/
Abstract

BACKGROUND

Genome-wide hypomethylation, a common epigenetic change that occurs during cancer development, primarily affects repetitive elements, such as Alu repeats. Consequently, Alu repeats can be used as a surrogate marker of genomic hypomethylation.

METHODS

In this study, we aimed to investigate the correlation between Alu methylation levels and the multistage course of gastric carcinogenesis.

RESULTS

We found that the Alu methylation levels in gastric cancer tissue decreased compared with those in normal gastric tissue, with the change in methylation levels and pattern being most significant between chronic gastritis and intestinal metaplasia. Moreover, Alu methylation levels were not associated with or Epstein-Barr virus infection.

CONCLUSIONS

Finally, our sensitivity and specificity analyses suggested that Alu methylation level can be used to distinguish gastric cancer tissue from normal tissue. Thus, Alu methylation level shows promise as biomarker for gastric cancer diagnosis.

摘要

背景

全基因组低甲基化是癌症发生过程中常见的表观遗传变化,主要影响重复元件,如Alu重复序列。因此,Alu重复序列可用作基因组低甲基化的替代标志物。

方法

在本研究中,我们旨在探讨Alu甲基化水平与胃癌发生多阶段过程之间的相关性。

结果

我们发现,与正常胃组织相比,胃癌组织中的Alu甲基化水平降低,甲基化水平和模式的变化在慢性胃炎和肠化生之间最为显著。此外,Alu甲基化水平与 或爱泼斯坦-巴尔病毒感染无关。

结论

最后,我们的敏感性和特异性分析表明,Alu甲基化水平可用于区分胃癌组织和正常组织。因此,Alu甲基化水平有望成为胃癌诊断的生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/891c/12101442/ffcfd9a5a430/peerj-13-19485-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/891c/12101442/151378c4f8c6/peerj-13-19485-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/891c/12101442/b5711e32b309/peerj-13-19485-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/891c/12101442/ffcfd9a5a430/peerj-13-19485-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/891c/12101442/151378c4f8c6/peerj-13-19485-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/891c/12101442/b5711e32b309/peerj-13-19485-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/891c/12101442/ffcfd9a5a430/peerj-13-19485-g003.jpg

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Cell. 2025 Feb 20;188(4):1156-1174.e20. doi: 10.1016/j.cell.2024.12.013. Epub 2025 Jan 20.
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LINE-1 cfDNA Methylation as an Emerging Biomarker in Solid Cancers.LINE-1 cfDNA甲基化作为实体癌中一种新兴的生物标志物。
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From the genome's perspective: Bearing somatic retrotransposition to leverage the regulatory potential of L1 RNAs.从基因组的角度来看:承受体细胞逆转座以利用L1 RNA的调控潜力。
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The common bisulfite-conversion-based techniques to analyze DNA methylation in human cancers.用于分析人类癌症中DNA甲基化的常见亚硫酸氢盐转化技术。
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