Zhang Hongrong, Li Yufan, Xu Qi, Fang Zhaohui
Anhui University of Chinese Medicine, Hefei, China.
Front Med (Lausanne). 2025 May 9;12:1537139. doi: 10.3389/fmed.2025.1537139. eCollection 2025.
Diabetic retinopathy (DR), one of the most common complications of diabetes, severely impacts patients' quality of life. The combined use of the traditional Chinese medicines Astragalus, Fructus ligustris, and Cornus officinalis has yielded considerable therapeutic effects in clinical DR treatment.
In this study, a multimodule framework (BNM) encompassing bioinformatics, network pharmacology, and machine learning (ML) based on molecular fingerprints was innovatively developed to thoroughly investigate the molecular mechanisms of this Chinese medicine in treating DR.
A total of 40 active components and 12 core targets were identified. Enrichment analysis identified key pathways such as VEGF signaling pathway, TNF signaling pathway and HIF-1 signaling pathway. Prediction models using key targets, such as PPARG, were constructed from the GEO database and validated via immune infiltration analysis and molecular docking, revealing that PPARG may be a potential target for DR treatment. Moreover, the core component of this Chinese medicine, stigmasterol, was identified using a ML model based on molecular fingerprints. experiments demonstrated that stigmasterol can regulate glucose and lipid metabolism, improve systemic inflammatory levels, and ameliorate ocular vascular changes in DR by modulating the expression of PPARG.
The BNM framework suggests that PPARG may be an important target for stigmasterol in the treatment of DR, with its mechanism potentially related to the VEGF/VEGFR pathway.
糖尿病视网膜病变(DR)是糖尿病最常见的并发症之一,严重影响患者的生活质量。中药黄芪、女贞子和山茱萸联合使用在临床DR治疗中取得了显著疗效。
在本研究中,创新性地开发了一个基于分子指纹图谱的包含生物信息学、网络药理学和机器学习(ML)的多模块框架(BNM),以深入研究这种中药治疗DR的分子机制。
共鉴定出40种活性成分和12个核心靶点。富集分析确定了关键通路,如VEGF信号通路、TNF信号通路和HIF-1信号通路。利用关键靶点(如PPARG)从GEO数据库构建预测模型,并通过免疫浸润分析和分子对接进行验证,结果表明PPARG可能是DR治疗的潜在靶点。此外,利用基于分子指纹图谱的ML模型鉴定出这种中药的核心成分豆甾醇。实验表明,豆甾醇可通过调节PPARG的表达来调节糖脂代谢、改善全身炎症水平并改善DR的眼部血管变化。
BNM框架表明,PPARG可能是豆甾醇治疗DR的重要靶点,其机制可能与VEGF/VEGFR通路有关。