Yu Jianchao, Sciolino Nicholas, Breindel Leonard, Lin Qishan, Burz David S, Shekhtman Alexander
Department of Chemistry, University at Albany, State University of New York, Albany, New York 12222, United States.
RNA Epitranscriptomics & Proteomics Resource, University at Albany, State University of New York, Albany, New York 12222, United States.
Biochemistry. 2025 Jun 17;64(12):2660-2678. doi: 10.1021/acs.biochem.5c00086. Epub 2025 May 27.
Quinary interactions between proteins and ribosomes play an important role in regulating biological activity through a phenomenon termed the Ribosome-Amplified MetaBOlism, RAMBO, effect. This effect has been documented in vitro but not in vivo. Real time pulse chase, RTPC, NMR spectroscopy, coupled with isotopic flux analysis in was used to validate the RAMBO effect in vivo. The ribosomal-targeting antibiotic chloramphenicol was employed to disrupt the quinary structure of pyruvate kinase, the final enzyme in glycolysis. Kinetic flux profiling demonstrated that the in vitro deactivation of the RAMBO effect by chloramphenicol was also observed in vivo, thereby confirming the potential role of ribosomes in regulating glycolysis. The noninvasive modular design of the RTPC-NMR platform allows for high-resolution metabolic monitoring across different cell types, providing broad applicability for studying the real-time metabolic responses to external stimuli in living cells.
蛋白质与核糖体之间的五元相互作用通过一种称为核糖体放大代谢(Ribosome-Amplified MetaBOlism,RAMBO)效应的现象在调节生物活性方面发挥重要作用。这种效应已在体外得到证实,但尚未在体内得到证实。实时脉冲追踪(RTPC)、核磁共振光谱以及同位素通量分析被用于在体内验证RAMBO效应。核糖体靶向抗生素氯霉素被用于破坏丙酮酸激酶(糖酵解的最后一种酶)的五元结构。动力学通量分析表明,氯霉素在体外使RAMBO效应失活的情况在体内也被观察到,从而证实了核糖体在调节糖酵解中的潜在作用。RTPC-NMR平台的非侵入性模块化设计允许对不同细胞类型进行高分辨率代谢监测,为研究活细胞对外部刺激的实时代谢反应提供了广泛的适用性。