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一种RNA甲基化途径调控肾脏的肾发生潜能。

An RNA transmethylation pathway governs kidney nephrogenic potential.

作者信息

Ramalingam Harini, Alvarez Jesus, Flaten Andrea, Cobo-Stark Patricia, Foster Nicholas, Grilli Elyse, Lakhia Ronak, Aboudehen Karam, Carroll Thomas, Patel Vishal

机构信息

Department of Internal Medicine and Division of Nephrology, UT Southwestern Medical Center, Dallas, TX, 75390, USA.

Department of Medicine and Division of Nephrology, Stony Brook University, Stony Brook, NY, USA.

出版信息

Nat Commun. 2025 May 28;16(1):4930. doi: 10.1038/s41467-025-60097-6.

DOI:10.1038/s41467-025-60097-6
PMID:40436842
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12120073/
Abstract

The adult kidney lacks the ability to generate new nephrons, placing individuals born with low nephron counts at greater risk for chronic kidney disease as they age. Limited nutrient availability hinders nephron formation; however, the key metabolic dependencies remain unclear. Here we show that S-adenosylmethionine (SAM) and cellular transmethylation status are crucial determinants of the kidney's nephrogenic capacity. The RNA methyltransferase METTL3 serves as a SAM sensor and is essential for the fate determination of nephron progenitor cells (NPCs). Reducing transmethylation or inhibiting METTL3 blocks NPC differentiation and nephrogenesis, whereas enhancing transmethylation or increasing METTL3 activity facilitates an induced NPC population and increases nephron production. Additionally, we identify Lrpprc mRNA, encoding a mitochondrially enriched protein, as a key direct target of METTL3-mediated transmethylation. Accordingly, inhibiting LRPPRC negates the nephrogenic effects of SAM and METTL3. Our findings reveal a modifiable methionine-SAM-RNA transmethylation pathway that can be targeted to enhance nephron formation.

摘要

成年肾脏缺乏生成新肾单位的能力,这使得出生时肾单位数量较低的个体随着年龄增长患慢性肾病的风险更高。营养物质供应有限会阻碍肾单位形成;然而,关键的代谢依赖性仍不清楚。在此,我们表明S-腺苷甲硫氨酸(SAM)和细胞甲基化状态是肾脏肾生成能力的关键决定因素。RNA甲基转移酶METTL3作为SAM传感器,对肾单位祖细胞(NPC)的命运决定至关重要。降低甲基化或抑制METTL3会阻断NPC分化和肾生成,而增强甲基化或增加METTL3活性则有利于诱导NPC群体并增加肾单位生成。此外,我们确定编码线粒体富集蛋白的Lrpprc mRNA是METTL3介导的甲基化的关键直接靶点。因此,抑制LRPPRC可消除SAM和METTL3的肾生成作用。我们的研究结果揭示了一条可调节的甲硫氨酸-SAM-RNA甲基化途径,该途径可作为增强肾单位形成的靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/3e78caf1d977/41467_2025_60097_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/90674bca6acc/41467_2025_60097_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/2c0b198dc2b1/41467_2025_60097_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/82de6b1ab9a9/41467_2025_60097_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/bbf94ec5e52d/41467_2025_60097_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/de235b3aae00/41467_2025_60097_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/3e78caf1d977/41467_2025_60097_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/90674bca6acc/41467_2025_60097_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/2c0b198dc2b1/41467_2025_60097_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/82de6b1ab9a9/41467_2025_60097_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/bbf94ec5e52d/41467_2025_60097_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/de235b3aae00/41467_2025_60097_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c424/12120073/3e78caf1d977/41467_2025_60097_Fig6_HTML.jpg

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本文引用的文献

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J Am Soc Nephrol. 2024 Oct 1;35(10):1312-1329. doi: 10.1681/ASN.0000000000000428. Epub 2024 Jun 10.
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Human Nephrogenesis can Persist Beyond 40 Postnatal Days in Preterm Infants.人类肾发生在早产儿中可在出生后40天以上持续存在。
Kidney Int Rep. 2023 Nov 4;9(2):436-450. doi: 10.1016/j.ekir.2023.10.032. eCollection 2024 Feb.
3
Depletion of SAM leading to loss of heterochromatin drives muscle stem cell ageing.
SAM 的耗竭导致异染色质的丢失,从而导致肌肉干细胞衰老。
Nat Metab. 2024 Jan;6(1):153-168. doi: 10.1038/s42255-023-00955-z. Epub 2024 Jan 19.
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A traditional gynecological medicine inhibits ovarian cancer progression and eliminates cancer stem cells via the LRPPRC-OXPHOS axis.传统妇科药物通过 LRPPRC-OXPHOS 轴抑制卵巢癌进展并消除癌症干细胞。
J Transl Med. 2023 Jul 26;21(1):504. doi: 10.1186/s12967-023-04349-3.
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The RNA-binding protein LRPPRC promotes resistance to CDK4/6 inhibition in lung cancer.LRPPRC 是一种 RNA 结合蛋白,可促进肺癌对 CDK4/6 抑制的耐药性。
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