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糖胺聚糖的纳米孔测序之路

The Road Toward Nanopore Sequencing of Glycosaminoglycans.

作者信息

Pietsch Wesley, Schumann Tom, Safferthal Marc, Geue Niklas, Pagel Kevin, Götze Michael

机构信息

Institute of Chemistry and Biochemistry, Freie Universität Berlin, Berlin, Germany.

Department of Molecular Physics, Fritz-Haber-Institut der Max-Planck-Gesellschaft, Berlin, Germany.

出版信息

Handb Exp Pharmacol. 2025;288:109-130. doi: 10.1007/164_2025_750.

Abstract

Nanopores have emerged as a powerful, label-free technique for single molecule analysis, offering high sensitivity and rapid analysis capabilities. Originally developed for DNA sequencing, nanopores have shown promise not only for the characterization of other biomolecules, such as RNA, proteins, and glycans but also of small inorganic compounds, such as nanoparticles. Glycosaminoglycans (GAGs) are a linear, highly charged subclass of glycans, which play essential roles in cell signaling, tissue development, and inflammation processes. The immense structural complexity of GAGs involving unique sulfation patterns renders their analysis challenging. This chapter provides a comprehensive overview on the application of biological and solid-state nanopores for the analysis of GAGs.

摘要

纳米孔已成为一种用于单分子分析的强大的无标记技术,具有高灵敏度和快速分析能力。纳米孔最初是为DNA测序而开发的,已显示出不仅在表征其他生物分子(如RNA、蛋白质和聚糖)方面,而且在表征小的无机化合物(如纳米颗粒)方面都具有潜力。糖胺聚糖(GAGs)是聚糖的一个线性、高电荷亚类,在细胞信号传导、组织发育和炎症过程中发挥着重要作用。GAGs巨大的结构复杂性,包括独特的硫酸化模式,使得它们的分析具有挑战性。本章全面概述了生物纳米孔和固态纳米孔在GAGs分析中的应用。

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