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一种网络药理学方法及实验验证,以研究灵芝孢子通过p53/半胱天冬酶3信号通路诱导细胞凋亡对急性肾损伤的保护机制。

A network pharmacology approach and experimental validation to investigate the protection mechanism of Ganoderma lucidum (Leyss. ex Fr.) Karst spore for acute kidney injury through induction of apoptosis via p53/Caspase 3 signaling pathway.

作者信息

Zhou Yue, Zhang Baowen, Wang Xiaodan, Liu Xiaoqin, Zhao Jinna, Wang Yanli, Gan Chunli

机构信息

Department of Pharmaceutical Analysis and Analytical Chemistry, College of Pharmacy, Harbin Medical University, No. 157 Baojian Road, Nangang District, Harbin, Heilongjiang, 150081, China.

Department of Pharmaceutical Analysis and Analytical Chemistry, College of Pharmacy, Harbin Medical University, No. 157 Baojian Road, Nangang District, Harbin, Heilongjiang, 150081, China; State Key Laboratory of Chemical Biology, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China; University of Chinese Academy of Sciences, Beijing, 100049, China.

出版信息

J Ethnopharmacol. 2025 Jul 24;351:120075. doi: 10.1016/j.jep.2025.120075. Epub 2025 May 30.

Abstract

ETHNOPHARMACOLOGICAL RELEVANCE

According to the Sheng Nong's herbal classic, one of the components Ganoderma lucidum (Leyss. ex Fr.) "benefits waterways and kidney qi". The reproductive cells of Ganoderma lucidum (Leyss. ex Fr.) Karst spore (GLS) has richer active substances, and the protective mechanism against acute kidney injury (AKI) needs to be clarified.

PURPOSE

This study dedicates to evaluate the effect of GLS on AKI, explores activation of the p53 signaling pathway, and investigates potential apoptosis-regulating mechanism.

METHODS

Gentamicin (GM) was used to establish an AKI rat model by intraperitoneal injection followed by the GLS intervention. The therapeutic efficacy of the GLS was evaluated based on function indices in rats. Network pharmacology was used to identify key proteins for the GLS intervention in AKI rats and bioinformatics analysis were performed. The initiation of the p53 signaling pathway was verified by molecular biology and surface enhanced raman spectroscopy (SERS).

RESULTS

UPLC-Q-Tof MS was carried to characterize the triterpene saponin analogs extracted from the GLS. The molecular docking results of the protein Caspase 3 showed that Autodock Binding energy was 8.86, and PyRx Binding Affinity was 9.6. Successfully established an AKI rat model. Compared with the GM group, the serum renal function markers in GLS dose groups were decreased; the degree of renal tissue lesions, renal tubular injury and inflammatory cell infiltration in GLS dose groups were significantly reduced, the expression of p53, Cytochrome C, BAX, Caspase-3 and Cleaved Caspase-3 proteins in the renal tissues of GLS dose groups were down-regulated, and the expression of BcL-2 protein was up-regulated. TUNEL staining and SERS also showed that GLS significantly inhibited the hyperapoptosis of kidney tissue caused by GM. This is the first study applying the GLS to treat GM-induced AKI.

CONCLUSION

This study was innovatively proposed that the GLS exerts a protective effect against AKI by inhibiting p53 overexpression. In addition, SERS was firstly applied to the spectroscopic observation of renal apoptotic tissues, and the results indicated that the GLS had a role in down-regulating excessive apoptosis in the injured kidney.

摘要

民族药理学相关性

据《神农本草经》记载,灵芝的其中一种成分“利水道,益肾气”。灵芝(Leyss. ex Fr.)的生殖细胞——灵芝孢子(GLS)含有更丰富的活性物质,其对急性肾损伤(AKI)的保护机制有待阐明。

目的

本研究致力于评估GLS对AKI的影响,探索p53信号通路的激活情况,并研究潜在的凋亡调节机制。

方法

通过腹腔注射庆大霉素(GM)建立AKI大鼠模型,随后进行GLS干预。基于大鼠的功能指标评估GLS的治疗效果。利用网络药理学确定GLS干预AKI大鼠的关键蛋白,并进行生物信息学分析。通过分子生物学和表面增强拉曼光谱(SERS)验证p53信号通路的启动。

结果

采用超高效液相色谱-四极杆飞行时间质谱(UPLC-Q-Tof MS)对从GLS中提取的三萜皂苷类似物进行表征。蛋白半胱天冬酶3(Caspase 3)的分子对接结果显示,自动对接结合能为8.86,PyRx结合亲和力为9.6。成功建立了AKI大鼠模型。与GM组相比,GLS剂量组的血清肾功能标志物降低;GLS剂量组的肾组织损伤程度、肾小管损伤和炎性细胞浸润明显减轻,GLS剂量组肾组织中p53、细胞色素C、BAX、半胱天冬酶-3(Caspase-3)和裂解的半胱天冬酶-3蛋白的表达下调,而BcL-2蛋白的表达上调。TUNEL染色和SERS也表明,GLS显著抑制了GM引起的肾组织过度凋亡。这是首次应用GLS治疗GM诱导的AKI的研究。

结论

本研究创新性地提出,GLS通过抑制p53过表达对AKI发挥保护作用。此外,首次将SERS应用于肾凋亡组织的光谱观察,结果表明GLS对受损肾脏中过度凋亡具有下调作用。

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