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代谢相关疾病的新型治疗靶点:蛋白质组学孟德尔随机化与共定位分析

Novel therapeutic targets for metabolism-related diseases: proteomic Mendelian randomization and colocalization analyses.

作者信息

Zhang Yue-Yang, Wang Bin-Lu, Chen Bing-Xue, Wan Qin

机构信息

Department of Endocrinology and Metabolism, Affiliated Hospital of Southwest Medical University, Luzhou, China.

Metabolic Vascular Disease Key Laboratory of Sichuan Province, Luzhou, China.

出版信息

Ther Adv Endocrinol Metab. 2025 May 31;16:20420188251343140. doi: 10.1177/20420188251343140. eCollection 2025.

DOI:10.1177/20420188251343140
PMID:40453312
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12126668/
Abstract

BACKGROUND

In recent years, driven by the rapid advancement of proteomics research, numerous scholars have investigated the intricate associations between plasma proteins and various diseases. Thus, this study aimed to identify novel therapeutic targets for preventing and treating metabolic-related diseases through Mendelian randomization (MR).

METHODS

This study primarily utilized the MR method, leveraging genetic data from multiple large-scale publicly available genome-wide association studies. We employed two-sample MR within this framework to assess the associations between 1001 plasma proteins and 5 metabolism-related diseases. Finally, we strengthen the robustness and reliability of the MR results by conducting a series of sensitivity analyses, including bidirectional MR, colocalization analysis, Cochran's test, and the MR-Egger intercept test.

RESULTS

The results from the inverse variance weighted method revealed that, following false discovery rate correction, many plasma proteins are significantly associated with metabolic-related diseases. Genetically predicted risks vary across diseases: for coronary artery disease, from 0.82 FGR proto-oncogene, Src family tyrosine kinase (FGR) to 1.13 (interleukin-6); for obesity, from 0.992 (POLR2F) to 1.005 (PRKAB1); for osteoporosis, from 0.998 (AIF1) to 1.001 (CLC); for stroke, from 0.71 (TNFRSF1A) to 1.47 (TGM2); and for type 2 diabetes, from 0.79 (KRT18) to 1.47 (RAB37).

CONCLUSION

Our findings reveal numerous plasma proteins linked to metabolic-related diseases. These findings offer fresh insights into the etiology, diagnostics, and treatment of these conditions.

摘要

背景

近年来,在蛋白质组学研究快速发展的推动下,众多学者研究了血浆蛋白与各种疾病之间的复杂关联。因此,本研究旨在通过孟德尔随机化(MR)确定预防和治疗代谢相关疾病的新治疗靶点。

方法

本研究主要采用MR方法,利用来自多个大规模公开可用的全基因组关联研究的遗传数据。我们在此框架内采用两样本MR来评估1001种血浆蛋白与5种代谢相关疾病之间的关联。最后,我们通过进行一系列敏感性分析来加强MR结果的稳健性和可靠性,包括双向MR、共定位分析、 Cochr an检验和MR-Egger截距检验。

结果

逆方差加权法的结果显示,经过错误发现率校正后,许多血浆蛋白与代谢相关疾病显著相关。不同疾病的遗传预测风险各不相同:冠状动脉疾病方面,从0.82(FGR原癌基因,Src家族酪氨酸激酶(FGR))到1.13(白细胞介素-6);肥胖方面,从0.992(POLR2F)到1.005(PRKAB1);骨质疏松症方面,从0.998(AIF1)到1.001(CLC);中风方面,从0.71(TNFRSF1A)到1.47(TGM2);2型糖尿病方面,从0.79(KRT18)到1.47(RAB37)。

结论

我们的研究结果揭示了许多与代谢相关疾病有关的血浆蛋白。这些发现为这些疾病的病因、诊断和治疗提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6599/12126668/903b401b301e/10.1177_20420188251343140-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6599/12126668/3745bac40f82/10.1177_20420188251343140-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6599/12126668/0615d8b7e7ab/10.1177_20420188251343140-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6599/12126668/f9c508354e0d/10.1177_20420188251343140-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6599/12126668/903b401b301e/10.1177_20420188251343140-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6599/12126668/3745bac40f82/10.1177_20420188251343140-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6599/12126668/0615d8b7e7ab/10.1177_20420188251343140-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6599/12126668/f9c508354e0d/10.1177_20420188251343140-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6599/12126668/903b401b301e/10.1177_20420188251343140-fig4.jpg

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本文引用的文献

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Effects of circulating inflammatory proteins on osteoporosis and fractures: evidence from genetic correlation and Mendelian randomization study.循环炎症蛋白对骨质疏松症和骨折的影响:来自遗传关联和孟德尔随机化研究的证据。
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​Comprehensive mendelian randomization analysis of plasma proteomics to identify new therapeutic targets for the treatment of coronary heart disease and myocardial infarction.
综合孟德尔随机化分析血浆蛋白质组学,以确定治疗冠心病和心肌梗死的新治疗靶点。
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Genetic associations with ratios between protein levels detect new pQTLs and reveal protein-protein interactions.遗传关联与蛋白质水平之间的比值检测新的 pQTL 并揭示蛋白质-蛋白质相互作用。
Cell Genom. 2024 Mar 13;4(3):100506. doi: 10.1016/j.xgen.2024.100506. Epub 2024 Feb 26.
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Mendelian randomization analysis suggests no associations of human herpes viruses with amyotrophic lateral sclerosis.孟德尔随机化分析表明,人类疱疹病毒与肌萎缩侧索硬化症无关联。
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Promising therapeutic targets for ischemic stroke identified from plasma and cerebrospinal fluid proteomes: a multicenter Mendelian randomization study.从血浆和脑脊液蛋白质组中鉴定出缺血性中风的有前途的治疗靶点:一项多中心孟德尔随机化研究。
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