Zhang Weiyuan, Chen Nan, Li Changxi, Su Xitian, Fu Zhuo, Zhong Youshuang, Deng Huojin
Department of Pulmonary and Critical Care Medicine, Zhujiang Hospital, Southern Medical University, Guangzhou, 510280, China.
Department of Cardiology, Laboratory of Heart Center, Zhujiang Hospital, Southern Medical University, Guangzhou, 510280, China.
BMC Pulm Med. 2025 Jun 4;25(1):280. doi: 10.1186/s12890-025-03751-5.
This study utilized Mendelian randomization (MR) to investigate the causal relationship between circulating plasma proteins and lung adenocarcinoma.
We obtained 734 circulating plasma protein data from genome-wide association studies (GWAS) as exposure factors and extracted single nucleotide polymorphisms (SNPs) as instrumental variables. And we obtained lung adenocarcinoma data (including 11,245 cases and 54,619 controls) from the IEU Open GWAS database as the outcome factor. The main analytical methods used are inverse-variance weighted (IVW) or Wald ratio to assess the causal relationship between circulating plasma protein levels and lung adenocarcinoma. Sensitivity analysis (leave one out method, heterogeneity and pleiotropy tests), external validation analysis, and meta-analysis after MR were used to evaluate the reliability of MR results. Finally, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed on the final screened plasma proteins.
Through the preliminary and external validation stages, ICAM5 (OR = 0.92, 95%CI: 0.89-0.95, P = 2.31 × 10), PCYOX1 (OR = 0.89, 95%CI: 0.85-0.93, P = 5.31 × 10), and TYMP (OR = 0.76, 95%CI: 0.66-0.87, P = 5.79 × 10) are negatively correlated with lung adenocarcinoma. Sensitivity analyses, external validation, and post-MR meta-analysis indicated that the MR results were robust. GO and KEGG pathway enrichment analyses demonstrated that these plasma proteins were primarily enriched in pathways such as "pyrimidine deoxyribonucleoside monophosphate metabolic process", "deoxyribonucleoside monophosphate catabolic process", "mitochondrial genome maintenance", and "Pyrimidine metabolism".
ICAM5, PCYOX1 and TYMP are associated with a decreased risk of lung adenocarcinoma. Plasma proteins may become new biological markers for lung adenocarcinoma, providing new insights into the prevention and treatment of this disease.
本研究利用孟德尔随机化(MR)方法来探究循环血浆蛋白与肺腺癌之间的因果关系。
我们从全基因组关联研究(GWAS)中获取了734种循环血浆蛋白数据作为暴露因素,并提取单核苷酸多态性(SNP)作为工具变量。同时,我们从IEU Open GWAS数据库中获取了肺腺癌数据(包括11245例病例和54619例对照)作为结局因素。主要使用的分析方法是逆方差加权(IVW)或Wald比率,以评估循环血浆蛋白水平与肺腺癌之间的因果关系。采用敏感性分析(逐一排除法、异质性和多效性检验)、外部验证分析以及MR后的荟萃分析来评估MR结果的可靠性。最后,对最终筛选出的血浆蛋白进行基因本体论(GO)和京都基因与基因组百科全书(KEGG)通路富集分析。
通过初步和外部验证阶段,细胞间黏附分子5(ICAM5)(比值比[OR]=0.92,95%置信区间[CI]:0.89 - 0.95,P = 2.31×10)、磷酸二酯酶α1(PCYOX1)(OR = 0.89,95%CI:0.85 - 0.93,P = 5.31×10)和胸苷磷酸化酶(TYMP)(OR = 0.76,95%CI:0.66 - 0.87,P = 5.79×10)与肺腺癌呈负相关。敏感性分析、外部验证以及MR后的荟萃分析表明,MR结果具有稳健性。GO和KEGG通路富集分析显示,这些血浆蛋白主要富集于“嘧啶脱氧核糖核苷单磷酸代谢过程”、“脱氧核糖核苷单磷酸分解代谢过程”、“线粒体基因组维持”和“嘧啶代谢”等通路。
ICAM5、PCYOX1和TYMP与肺腺癌风险降低相关。血浆蛋白可能成为肺腺癌新的生物标志物,为该疾病的预防和治疗提供新的见解。