Detection of parasites in environmental samples from Lithuanian farms.

Most studies on apicomplexan spp. in domestic animals have primarily focused on examining animal carcasses using both morphological and molecular methods. However, to accurately assess the risk of infections in livestock and to develop effective prevention strategies, it is essential to investigate the environmental reservoirs of these parasites. The aim of this study was to identify species with domestic animals as intermediate hosts by analysing environmental samples (water, hay, and soil) collected from Lithuanian farms and to compare their occurrence across different sample types. In total, 90 environmental samples were collected over 3 years and analysed for the presence of spp. using nested polymerase chain reactions targeting the gene. The results indicated that livestock are most likely to acquire infections via the ingestion of contaminated water or feed, while soil posed a lower risk of transmission. An assessment of species distribution across sampled farms revealed that the type of livestock raised did not influence the diversity of spp. Notably, at least six of seven target species (, , , , , , ) were detected at least once on eight of 10 farms. Additionally, two zoonotic species, and , were identified in environmental samples. This study emphasises the potential risk of livestock infection through contaminated environmental and feed sources and highlights the critical role of environmental monitoring in preventing the transmission of spp. to farm animals.