Srivastava Shashank, Samaniego-Castruita Daniela, Khurana Sakshi, Shukla Vipul, Ben-Sahra Issam, Foltz Daniel R
bioRxiv. 2025 May 23:2025.05.21.655426. doi: 10.1101/2025.05.21.655426.
Chromatin formation requires both an adequate nucleotide supply and sufficient availability of histones. Chromatin must be assembled following DNA-based fundamental cellular processes such as replication and transcription to preserve genome integrity. Chromatin assembly is regulated by the orderly engagement of histones with a series of histone chaperones that guide newly synthesized histones from ribosomes to DNA. Although the synthesis of nucleotides and the histone proteins are the two major biosynthetic processes that complete the formation of chromatin, how these processes are coordinated remains unknown. Phosphoribosyl pyrophosphate synthetases (PRPSs) catalyze the first and rate-limiting step in the nucleotide biosynthesis pathway. PRPS enzymes form a complex with PRPS-associated proteins (PRPSAPs). In the present study, we discover that PRPS-PRPSAP enzyme complex are part of histone chaperone network. We show that PRPS enzymes are essential not only for nucleotide biogenesis, but together with PRPSAP also play a key role in the early steps in the process of histone maturation by regulating the interaction of histone chaperones with histone H3 and H4. Importantly, this regulation is separate from PRPS nucleotide biosynthetic activity. Depletion of PRPS proteins leads to limited histone availability and impaired chromatin assembly. Our discovery bridges cellular metabolism and chromatin regulation and provides the evidence of how nucleotide biogenesis and histone deposition are coordinated.
染色质的形成既需要充足的核苷酸供应,也需要足够的组蛋白。染色质必须在基于DNA的基本细胞过程(如复制和转录)之后进行组装,以保持基因组的完整性。染色质组装受组蛋白与一系列组蛋白伴侣有序结合的调节,这些伴侣将新合成的组蛋白从核糖体引导至DNA。尽管核苷酸合成和组蛋白合成是完成染色质形成的两个主要生物合成过程,但这些过程如何协调仍不清楚。磷酸核糖焦磷酸合成酶(PRPSs)催化核苷酸生物合成途径中的第一步且是限速步骤。PRPS酶与PRPS相关蛋白(PRPSAPs)形成复合物。在本研究中,我们发现PRPS-PRPSAP酶复合物是组蛋白伴侣网络的一部分。我们表明,PRPS酶不仅对核苷酸生物合成至关重要,而且与PRPSAP一起,通过调节组蛋白伴侣与组蛋白H3和H4的相互作用,在组蛋白成熟过程的早期步骤中也发挥关键作用。重要的是,这种调节与PRPS的核苷酸生物合成活性无关。PRPS蛋白的缺失导致组蛋白可用性受限和染色质组装受损。我们的发现架起了细胞代谢与染色质调节之间的桥梁,并提供了核苷酸生物合成与组蛋白沉积如何协调的证据。