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基于代谢物的网络药理学、分子对接和动力学模拟初步验证古尼醇治疗糖尿病性脑病的效果

Metabolite-Based Network Pharmacology, Molecular Docking, and Dynamics Simulations to Preliminarily Verify Treating Diabetic Encephalopathy Effect of Kuwanon G.

作者信息

Zhang Yuqian, Zhang Siying, Niu Haiying, Xie Weiwei, Tan Yuxin, Li Deqiang, Jin Yiran

机构信息

The Second Hospital of Hebei Medical University Shijiazhuang Hebei P. R. China.

The First Hospital of Hebei Medical University Shijiazhuang Hebei P. R. China.

出版信息

Food Sci Nutr. 2025 Jun 7;13(6):e70392. doi: 10.1002/fsn3.70392. eCollection 2025 Jun.

DOI:10.1002/fsn3.70392
PMID:40488190
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12144589/
Abstract

Kuwanon G (KWG), a bioactive flavonoid from mulberry, exhibits potential neuroprotective effects against diabetic encephalopathy (DE), yet its metabolic fate and therapeutic mechanisms remain unclear. This study integrated ultra-high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UHPLC-Q-TOF-MS), network pharmacology, molecular docking, and dynamics simulations to characterize KWG's metabolic profile and evaluate its anti-DE activity. In vivo and in vitro analyses identified 56 metabolites in rats, predominantly formed via oxidation, dehydrogenation, methylation, and glucuronidation. Nine metabolites with high intestinal absorption and pharmacophore compatibility were selected using Swiss ADME. Network pharmacology revealed core targets (AKT1, TNF, SRC, EGFR, ESR1) linked to DE, while molecular docking demonstrated strong binding affinities (-4.87 to -43.41 kcal/mol) between active metabolites (N1, N4, N6, N8) and these targets. Dynamics simulations confirmed stable interactions, highlighting metabolites' roles in modulating PI3K-Akt signaling and neurodegeneration pathways. Notably, KWG itself exhibited negligible binding, suggesting its metabolites are the primary bioactive forms. These findings underscore the importance of gut microbiota-mediated biotransformation in enhancing KWG's bioavailability and neuroprotective efficacy. This work provides critical insights into the metabolic activation of natural products and advances their application in functional foods or therapeutics for diabetes-related complications.

摘要

桑色素G(KWG)是一种从桑树中提取的具有生物活性的黄酮类化合物,对糖尿病性脑病(DE)具有潜在的神经保护作用,但其代谢命运和治疗机制仍不清楚。本研究综合运用超高效液相色谱-四极杆飞行时间质谱(UHPLC-Q-TOF-MS)、网络药理学、分子对接和动力学模拟,以表征KWG的代谢谱并评估其抗DE活性。体内和体外分析在大鼠体内鉴定出56种代谢产物,主要通过氧化、脱氢、甲基化和葡萄糖醛酸化形成。使用瑞士ADME筛选出9种具有高肠道吸收和药效团兼容性的代谢产物。网络药理学揭示了与DE相关的核心靶点(AKT1、TNF、SRC、EGFR、ESR1),而分子对接表明活性代谢产物(N1、N4、N6、N8)与这些靶点之间具有很强的结合亲和力(-4.87至-43.41 kcal/mol)。动力学模拟证实了稳定的相互作用,突出了代谢产物在调节PI3K-Akt信号通路和神经退行性变途径中的作用。值得注意的是,KWG本身的结合作用可忽略不计,表明其代谢产物是主要的生物活性形式。这些发现强调了肠道微生物群介导的生物转化在提高KWG的生物利用度和神经保护功效方面的重要性。这项工作为天然产物的代谢活化提供了关键见解,并推动了它们在糖尿病相关并发症的功能性食品或治疗中的应用。

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