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SIRT7调节NUCKS1与染色质的结合,以引发衰老和肝脏衰老过程中的代谢和炎症基因表达。

SIRT7 regulates NUCKS1 chromatin binding to elicit metabolic and inflammatory gene expression in senescence and liver aging.

作者信息

Tran Khoa A, Gilbert Michael, Vazquez Berta N, Ianni Alessandro, Garcia Benjamin A, Vaquero Alejandro, Berger Shelley L

机构信息

Penn Epigenetics Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Departments of Cell and Developmental Biology, Genetics, Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.

Penn Epigenetics Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, MO 63110, USA.

出版信息

Mol Cell. 2025 Jun 19;85(12):2390-2408.e6. doi: 10.1016/j.molcel.2025.05.025. Epub 2025 Jun 12.

Abstract

Sirtuin enzymes are deeply associated with senescence and aging. Sirtuin proteins are tightly regulated, but how their levels are governed during aging and how they elicit tissue-specific cellular changes are unclear. Here, we demonstrate that SIRT7 undergoes proteasomal degradation during senescence via targeting by the E3 ligase TRIP12. We identified the transcription factor nuclear casein kinase and cyclin-dependent kinase substrate 1 (NUCKS1) as an interactor of SIRT7 and found NUCKS1 recruitment onto chromatin during senescence mediated by SIRT7 loss, correlating with increased NUCKS1 acetylation. NUCKS1 depletion delayed senescence, leading to reduced inflammatory gene expression associated with transcription factors RELA and CEBPβ. In Sirt7 knockout and aged mouse livers, NUCKS1 was bound at the promoters and enhancers of age-related genes, and these regulatory regions gained accessibility during aging. Overall, our results uncover NUCKS1 as an interactor of SIRT7 and indicate that proteasomal loss of SIRT7 during senescence and liver aging promotes NUCKS1 acetylation and chromatin binding to induce metabolic and inflammatory genes.

摘要

沉默调节蛋白(Sirtuin)酶与衰老密切相关。沉默调节蛋白的水平受到严格调控,但在衰老过程中其水平是如何被控制的,以及它们如何引发组织特异性的细胞变化尚不清楚。在这里,我们证明沉默信息调节因子7(SIRT7)在衰老过程中通过E3泛素连接酶甲状腺激素受体相互作用蛋白12(TRIP12)的靶向作用而经历蛋白酶体降解。我们鉴定出转录因子核酪蛋白激酶和细胞周期蛋白依赖性激酶底物1(NUCKS1)是SIRT7的相互作用蛋白,并发现由SIRT7缺失介导的衰老过程中,NUCKS1被招募到染色质上,这与NUCKS1乙酰化增加相关。敲低NUCKS1可延缓衰老,导致与转录因子RELA和CEBPβ相关的炎症基因表达减少。在Sirt7基因敲除小鼠和老年小鼠的肝脏中,NUCKS1结合在衰老相关基因的启动子和增强子上,并且这些调控区域在衰老过程中变得可及。总体而言,我们的研究结果揭示了NUCKS1是SIRT7的相互作用蛋白,并表明衰老和肝脏衰老过程中SIRT7的蛋白酶体降解促进了NUCKS1的乙酰化和染色质结合,从而诱导代谢和炎症基因的表达。

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Highly accurate protein structure prediction with AlphaFold.利用 AlphaFold 进行高精度蛋白质结构预测。
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