Suppr超能文献

三配位血红蛋白的构象动力学

Conformational kinetics of triligated hemoglobin.

作者信息

Ferrone F A, Martino A J, Basak S

出版信息

Biophys J. 1985 Aug;48(2):269-82. doi: 10.1016/S0006-3495(85)83780-2.

Abstract

We have used the method of modulated excitation (Ferrone, F.A., and J.J. Hopfield, 1976, Proc. Natl. Acad. Sci. USA. 73:4497-4501), with an improved apparatus and a revised analytical procedure, to measure the rate of conformational change between the oxy (R) and deoxy (T) conformations of triligated carboxy-hemoglobin A at pH 6.5 and 7.0. We have found the rates to be kRT = 1.2 X 10(3) s-1 and kTR = 3.5 X 10(3) s-1 for pH 6.5, while for pH 7.0, kRT = 1.0 X 10(3) s-1, and kTR = 3.0 X 10(3) s-1. The value for L3, the equilibrium constant between conformations, was virtually unchanged between pH 6.5 and 7.0. While the rates measured here differ from those obtained in the original use of this method, these new rates are fully consistent with the original data when analyzed by the revised procedures presented here. When taken with other kinetic and equilibrium data, our measurements suggest that the transition state between structures is dominated by the behavior of the T quaternary structure. Finally, a spectral feature near the HbCO Soret peak has been observed that we ascribe to an allosteric perturbation of the spectra of the liganded hemes.

摘要

我们采用调制激发方法(费罗内,F.A.,和J.J.霍普菲尔德,1976年,《美国国家科学院院刊》。73:4497 - 4501),使用改进的仪器和修订的分析程序,来测量在pH 6.5和7.0条件下三配位羧基血红蛋白A的氧合(R)构象与脱氧(T)构象之间的构象变化速率。我们发现,在pH 6.5时,速率为kRT = 1.2×10³ s⁻¹,kTR = 3.5×10³ s⁻¹;而在pH 7.0时,kRT = 1.0×10³ s⁻¹,kTR = 3.0×10³ s⁻¹。构象之间的平衡常数L3的值在pH 6.5和7.0之间几乎没有变化。虽然这里测量的速率与最初使用该方法时获得的速率不同,但当按照这里提出的修订程序进行分析时,这些新速率与原始数据完全一致。结合其他动力学和平衡数据来看,我们的测量结果表明,结构之间的过渡态主要由T四级结构的行为主导。最后,在HbCO Soret峰附近观察到一个光谱特征,我们将其归因于配位血红素光谱的变构扰动。

相似文献

1
Conformational kinetics of triligated hemoglobin.
Biophys J. 1985 Aug;48(2):269-82. doi: 10.1016/S0006-3495(85)83780-2.
2
Allosteric kinetics and equilibria differ for carbon monoxide and oxygen binding to hemoglobin.
Biophys J. 1990 Aug;58(2):333-40. doi: 10.1016/S0006-3495(90)82380-8.
3
Rate of allosteric change in hemoglobin measured by modulated excitation using fluorescence detection.
Biophys J. 1989 Oct;56(4):781-94. doi: 10.1016/S0006-3495(89)82725-0.
4
Coupling of ferric iron spin and allosteric equilibrium in hemoglobin.
Biophys J. 1991 Oct;60(4):770-6. doi: 10.1016/S0006-3495(91)82111-7.
5
Allosteric kinetics and equilibria of triligated, cross-linked hemoglobin.
Biophys J. 1993 May;64(5):1520-32. doi: 10.1016/S0006-3495(93)81521-2.
6
T-quaternary structure of oxy human adult hemoglobin in the presence of two allosteric effectors, L35 and IHP.
Biochim Biophys Acta. 2011 Oct;1807(10):1253-61. doi: 10.1016/j.bbabio.2011.06.004. Epub 2011 Jun 15.

引用本文的文献

1
Nanosecond time-resolved absorption studies of human oxyhemoglobin photolysis intermediates.
Biophys J. 1996 Sep;71(3):1596-604. doi: 10.1016/S0006-3495(96)79362-1.
2
Quaternary structure dynamics and carbon monoxide binding kinetics of hemoglobin valency hybrids.
Biophys J. 1996 Apr;70(4):1949-65. doi: 10.1016/S0006-3495(96)79760-6.
3
Allosteric kinetics and equilibria of triligated, cross-linked hemoglobin.
Biophys J. 1993 May;64(5):1520-32. doi: 10.1016/S0006-3495(93)81521-2.
4
Rate of allosteric change in hemoglobin measured by modulated excitation using fluorescence detection.
Biophys J. 1989 Oct;56(4):781-94. doi: 10.1016/S0006-3495(89)82725-0.
5
Allosteric kinetics and equilibria differ for carbon monoxide and oxygen binding to hemoglobin.
Biophys J. 1990 Aug;58(2):333-40. doi: 10.1016/S0006-3495(90)82380-8.

本文引用的文献

1
The photochemical formation of a quickly reacting form of haemoglobin.
Biochem J. 1959 Feb;71(2):293-303. doi: 10.1042/bj0710293.
2
Tetramer-dimer dissociation of carboxyhemoglobin in the absence of dithionite.
Biophys J. 1981 Aug;35(2):265-70. doi: 10.1016/S0006-3495(81)84788-1.
4
Hemoglobin tertiary structural change on ligand binding. Its role in the co-operative mechanism.
J Mol Biol. 1983 Dec 25;171(4):489-559. doi: 10.1016/0022-2836(83)90042-6.
5
A quantitative model for the cooperative mechanism of human hemoglobin.
Proc Natl Acad Sci U S A. 1984 Feb;81(4):1093-7. doi: 10.1073/pnas.81.4.1093.
6
Structure-specific model of hemoglobin cooperativity.
Proc Natl Acad Sci U S A. 1983 Dec;80(23):7055-9. doi: 10.1073/pnas.80.23.7055.
7
Nanosecond absorption spectroscopy of hemoglobin: elementary processes in kinetic cooperativity.
Proc Natl Acad Sci U S A. 1983 Apr;80(8):2235-9. doi: 10.1073/pnas.80.8.2235.
9
An allosteric model of hemoglobin. I. Kinetics.
J Mol Biol. 1971 Oct 28;61(2):425-43. doi: 10.1016/0022-2836(71)90391-3.
10
Influence of globin structure on the state of the heme. I. Human deoxyhemoglobin.
Biochemistry. 1974 May 7;13(10):2163-73. doi: 10.1021/bi00707a026.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验