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利用全外显子组测序和蛋白质预测分析在原发性双侧大结节性肾上腺增生中发现的一种新的ARMC5胚系变体

A NEW-FOUND ARMC5 GERMLINE VARIANT IN PRIMARY BILATERAL MACRONODULAR ADRENAL HYPERPLASIA USING WHOLE-EXOME SEQUENCING AND PROTEIN PREDICTIVE ANALYSIS.

作者信息

Zhang Y, Tao Y, Wu Q, Liu X, Zou C, Geng H

机构信息

Department of Endocrine, Xuzhou Central Hospital, Xuzhou, China.

Department of Endocrine, Xuzhou Medical University, Xuzhou, China.

出版信息

Acta Endocrinol (Buchar). 2024 Jul-Sep;20(3):277-285. doi: 10.4183/aeb.2024.277. Epub 2025 May 23.

DOI:10.4183/aeb.2024.277
PMID:40530093
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12169828/
Abstract

OBJECTIVE

ARMC5 mutations are responsible for the development of primary bilateral macronodular adrenal hyperplasia (PBMAH). In this study, we aimed to report a novel ARMC5 germline variant in a PBMAH patient family.

METHOD

CT examination and dexamethasone suppression test (DST) were used in the diagnosis of PBMAH. Sanger sequencing was used to validate the familial heredity. For the novel variant, protein predictive analysis was performed to study the changes of secondary and tertiary structures and hydrophobicity.

RESULTS

A 45 years old male (proband, III-1) was diagnosed as PBMAH. Whole-exome sequencing (WES) was performed, finding one mutation: c.719_ 724dup, p Arg240_ Pro241dup. Sanger sequencing showed the II-2, III-1, IV-1 with heterozygous gene, confirming the familial heredity. For protein predictive analysis, the predicted secondary structure of variants has one alpha-helix structure incomplete compared with normal ARMC5. The tertiary structure could draw the same conclusion, that hydrophobicity decreases after mutation.

CONCLUSION

We reported a new-found ARMC5 germline variant in PBMAH using WES and protein predictive analysis. With the help of WES, early diagnosis of PBMAH could help variant carriers to prevent the occurrence of cancer by lifetime follow-up.

摘要

目的

ARMC5突变是原发性双侧大结节性肾上腺增生(PBMAH)发病的原因。在本研究中,我们旨在报告一个PBMAH患者家族中的一种新的ARMC5种系变体。

方法

采用CT检查和地塞米松抑制试验(DST)诊断PBMAH。采用桑格测序法验证家族遗传性。对于新变体,进行蛋白质预测分析以研究二级和三级结构以及疏水性的变化。

结果

一名45岁男性(先证者,III-1)被诊断为PBMAH。进行了全外显子组测序(WES),发现一个突变:c.719_724dup,p.Arg240_Pro241dup。桑格测序显示II-2、III-1、IV-1为杂合基因,证实了家族遗传性。对于蛋白质预测分析,与正常ARMC5相比,变体的预测二级结构有一个α-螺旋结构不完整。三级结构也能得出相同结论,即突变后疏水性降低。

结论

我们通过WES和蛋白质预测分析报告了PBMAH中一种新发现的ARMC5种系变体。借助WES,PBMAH的早期诊断有助于变体携带者通过终身随访预防癌症的发生。

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本文引用的文献

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A Novel Germline Variant in Primary Macronodular Adrenal Hyperplasia Using Whole-Exome Sequencing.利用全外显子组测序发现原发性大结节性肾上腺增生中的一种新型种系变异。
Diagnostics (Basel). 2022 Dec 2;12(12):3028. doi: 10.3390/diagnostics12123028.
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CONGENITAL ADRENAL HYPERPLASIA WITH COMPOUND HETEROZYGOUS I2 SPLICE AND P453S MUTATIONS.先天性肾上腺皮质增生症伴I2剪接和P453S突变的复合杂合子
Acta Endocrinol (Buchar). 2022 Apr-Jun;18(2):228-231. doi: 10.4183/aeb.2022.228.
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ARMC5-CUL3 E3 ligase targets full-length SREBF in adrenocortical tumors.ARMC5-CUL3 E3 连接酶靶向肾上腺皮质肿瘤中的全长 SREBF。
JCI Insight. 2022 Aug 22;7(16):e151390. doi: 10.1172/jci.insight.151390.
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ARMC5 is part of an RPB1-specific ubiquitin ligase implicated in adrenal hyperplasia.ARMC5 是一种与 RPB1 特异性泛素连接酶有关的基因,该酶与肾上腺增生有关。
Nucleic Acids Res. 2022 Jun 24;50(11):6343-6367. doi: 10.1093/nar/gkac483.
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Demographic Characteristics, Etiology, and Comorbidities of Patients with Cushing's Syndrome: A 10-Year Retrospective Study at a Large General Hospital in China.库欣综合征患者的人口统计学特征、病因及合并症:中国一家大型综合医院的10年回顾性研究
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Coordination of Protein Kinase and Phosphoprotein Phosphatase Activities in Mitosis.有丝分裂中蛋白激酶与磷蛋白磷酸酶活性的协调
Front Cell Dev Biol. 2018 Mar 22;6:30. doi: 10.3389/fcell.2018.00030. eCollection 2018.
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Age-dependent effects of Armc5 haploinsufficiency on adrenocortical function.Armc5单倍体不足对肾上腺皮质功能的年龄依赖性影响。
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The role of ARMC5 in human cell cultures from nodules of primary macronodular adrenocortical hyperplasia (PMAH).在原发性大结节性肾上腺皮质增生症(PMAH)结节的人类细胞培养物中 ARMC5 的作用。
Mol Cell Endocrinol. 2018 Jan 15;460:36-46. doi: 10.1016/j.mce.2017.06.027. Epub 2017 Jul 1.
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Novel Insights into the Genetics and Pathophysiology of Adrenocortical Tumors.肾上腺皮质肿瘤遗传学与病理生理学的新见解
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