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重塑亮氨酸脱氢酶的底物结合口袋以高效合成L-苯甘氨酸及其取代衍生物

Reshaping the Substrate-Binding Pocket of Leucine Dehydrogenase for Efficient Synthesis of l-Phenylglycine and Its Substituted Derivatives.

作者信息

Zhao Lu, Zhang Wenhe, Li Min, Liu Qi, Zhang Zhuobing, Gao Xiao, Qin Bin, Abe Ikuro, Jia Xian, You Song

机构信息

School of Life Sciences and Biopharmaceutical Sciences, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang 110016, People's Republic of China.

Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.

出版信息

J Agric Food Chem. 2025 Jul 2;73(26):16515-16525. doi: 10.1021/acs.jafc.5c03564. Epub 2025 Jun 19.

Abstract

l-Leucine dehydrogenase (LeuDH)-mediated direct asymmetric reduction amination of prochiral α-keto acids represents an ideal approach for the synthesis of l-phenylglycine and its derivatives. However, limited substrate acceptance hinders their applications. Herein, we systematically investigated the substrate acceptance of LeuDHs for benzoylformic acid and its monosubstituted derivatives, revealing the correlation between substrate structure and enzyme activity. Meanwhile, to efficiently augment the LeuDH overall catalytic activity toward monosubstituted benzoylformic acids, we reported a two-stage screening strategy using -chlorobenzoylformic acid () as the starting screening substrate. A superior mutant library with 10-127-fold enhanced catalytic efficiency toward (M2-1 (L40V/V294A) and M2-2 (E114V/V294G)) and and (M2-4 (E114L/V294G)) substituted benzoylformic acids was generated, and following future backtracking analysis, mutant M2-3 (L40V/T134G) with further increased catalytic activity of -substituted substrates was obtained. Furthermore, gram-scale asymmetric synthesis of l-phenylglycine (), L--fluorophenylglycine (), and L--chlorophenylglycine () was performed with high substrate loading (1 M) and space-time yields up to 1800, 2016, and 2208 g/L·day, respectively. This study provides efficient biocatalysts for the synthesis of l-phenylglycine and its derivatives and establishes a referable engineering workflow for the collective evolution of amino acid dehydrogenase against differently positioned substituted substrate panels.

摘要

L-亮氨酸脱氢酶(LeuDH)介导的前手性α-酮酸直接不对称还原胺化反应是合成L-苯甘氨酸及其衍生物的理想方法。然而,有限的底物适应性阻碍了它们的应用。在此,我们系统地研究了LeuDHs对苯甲酰甲酸及其单取代衍生物的底物适应性,揭示了底物结构与酶活性之间的相关性。同时,为了有效提高LeuDH对单取代苯甲酰甲酸的整体催化活性,我们报道了一种以对氯苯甲酰甲酸()为起始筛选底物的两阶段筛选策略。构建了一个对(M2-1(L40V/V294A)和M2-2(E114V/V294G))以及对和(M2-4(E114L/V294G))取代的苯甲酰甲酸催化效率提高10-127倍的优良突变体文库,经过进一步的回溯分析,获得了对对位取代底物催化活性进一步提高的突变体M2-3(L40V/T134G)。此外,以高底物负载量(1 M)进行了L-苯甘氨酸()、L-对氟苯甘氨酸()和L-对氯苯甘氨酸()的克级不对称合成,时空产率分别高达1800、2016和2208 g/L·天。本研究为L-苯甘氨酸及其衍生物的合成提供了高效的生物催化剂,并建立了针对不同位置取代底物的氨基酸脱氢酶集体进化的参考工程流程。

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