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来自香蕉(芭蕉属)的两个尖孢镰刀菌古巴专化型分离株的长读长基因组草图序列

Long-Read Draft Genome Sequences of Two f. sp. Isolates from Banana ( spp.).

作者信息

Sun Jiaman, Zhang Jinzhong, Gardiner Donald M, van Dam Peter, Fu Gang, Ferguson Brett J, Aitken Elizabeth A B, Chen Andrew

机构信息

Guangdong Provincial Key Laboratory of Conservation and Precision Utilization of Characteristic Agricultural Resources in Mountainous Areas, School of Life Science, Jiaying University, Meizhou 514015, China.

Guangxi Academy of Agricultural Sciences, Nanning 530007, China.

出版信息

J Fungi (Basel). 2025 May 30;11(6):421. doi: 10.3390/jof11060421.

DOI:10.3390/jof11060421
PMID:40558933
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12193908/
Abstract

f. sp. () causes Fusarium wilt, a devastating epidemic disease that has caused widespread damage to banana crops worldwide. We report the draft genomes of race 1 (16117) and tropical race 4 (CNSD1) isolates from China, assembled using PacBio HiFi sequencing reads, with functional annotation performed. The strains group in distinct lineages within the species complex. This genetic resource will contribute towards understanding the pathogenicity and evolutionary dynamics of populations in banana-growing regions around the world.

摘要

尖孢镰刀菌古巴专化型(Fusarium oxysporum f. sp. cubense)引发香蕉枯萎病,这是一种具有毁灭性的流行性病害,已在全球范围内对香蕉作物造成广泛损害。我们报告了来自中国的1号生理小种(16117)和热带4号生理小种(CNSD1)分离株的基因组草图,这些草图是使用PacBio HiFi测序读数组装而成,并进行了功能注释。这些菌株在尖孢镰刀菌物种复合体内的不同谱系中分组。这一遗传资源将有助于了解全球香蕉种植区尖孢镰刀菌种群的致病性和进化动态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68f2/12193908/a4572372e199/jof-11-00421-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68f2/12193908/f33502eae801/jof-11-00421-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68f2/12193908/1d03218c1642/jof-11-00421-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68f2/12193908/e6a431fd2da6/jof-11-00421-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68f2/12193908/a4572372e199/jof-11-00421-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68f2/12193908/f33502eae801/jof-11-00421-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68f2/12193908/1d03218c1642/jof-11-00421-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68f2/12193908/e6a431fd2da6/jof-11-00421-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68f2/12193908/a4572372e199/jof-11-00421-g004.jpg

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本文引用的文献

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Secreted in Xylem (SIX) genes in Fusarium oxysporum f.sp. cubense (Foc) unravels the potential biomarkers for early detection of Fusarium wilt disease.在尖孢镰刀菌古巴专化型(Foc)的木质部分泌(SIX)基因中发现,为镰刀菌枯萎病的早期检测提供了潜在的生物标志物。
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Interactive Tree of Life (iTOL) v6: recent updates to the phylogenetic tree display and annotation tool.交互式生命树 (iTOL) v6:系统发育树显示和注释工具的最新更新。
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