Suppr超能文献

从秘鲁塔克纳地热田分离出的G4菌株的功能表征、基因组组装与注释

Functional Characterization, Genome Assembly, and Annotation of sp. G4 Isolated from a Geothermal Field in Tacna, Peru.

作者信息

Ticona Alonso R Poma, Santos Karita C R, Ramirez-Arua Heber E, Castellanos Roberto, Silva Jéssica Pinheiro, Hamann Pedro R Vieira, Noronha Eliane F, Lopes Fabyano A C

机构信息

Enzyme Biotechnology Research Laboratory, Science Faculty, Universidad Nacional Jorge Basadre Grohmann, Tacna 23003, Peru.

Laboratório de Microbiologia, Universidade Federal Do Tocantins, Porto Nacional 77500-000, TO, Brazil.

出版信息

Microorganisms. 2025 Jun 13;13(6):1374. doi: 10.3390/microorganisms13061374.

Abstract

The genome of sp. G4, a thermophilic bacterium isolated from a geothermal field in Peru, was sequenced and analyzed to evaluate its taxonomic and biotechnological potential. This strain exhibits optimal growth at temperatures between 50 and 70 °C and at a pH range of 6.0-7.5. Phenotypic assays demonstrated extracellular enzymatic activities, including amylases, cellulases, pectinases, and xylanases, highlighting its potential for efficient polysaccharide degradation. The assembled genome comprises approximately 3.4 Mb with a G+C content of 52.59%, containing 3,490 genes, including coding sequences, rRNAs, and tRNAs. Functional annotation revealed genes associated with key metabolic pathways such as glycogen and trehalose biosynthesis, indicating adaptation to carbohydrate-rich environments. Phylogenetic analyses based on ANI and dDDH values identified KCTC3570 as its closest relative, suggesting a strong evolutionary relationship. Additionally, the genome harbors gene clusters for secondary metabolites such as betalactone and fengycin, suggesting potential industrial and pharmaceutical applications, including bioremediation. The identification of antibiotic resistance genes, specifically those conferring glycopeptide resistance, underscores their relevance for antimicrobial resistance studies. The presence of enzymes like amylases and pullulanase further emphasizes its biotechnological potential, particularly in starch hydrolysis and biofuel production. Overall, this research highlights the significant potential of species as valuable sources of thermostable enzymes and biosynthetic pathways for industrial applications.

摘要

从秘鲁一个地热田分离出的嗜热细菌sp. G4的基因组进行了测序和分析,以评估其分类学和生物技术潜力。该菌株在50至70°C的温度和6.0 - 7.5的pH范围内表现出最佳生长。表型分析表明其具有细胞外酶活性,包括淀粉酶、纤维素酶、果胶酶和木聚糖酶,突出了其高效降解多糖的潜力。组装后的基因组约为3.4 Mb,G+C含量为52.59%,包含3490个基因,包括编码序列、rRNA和tRNA。功能注释揭示了与关键代谢途径相关的基因,如糖原和海藻糖生物合成,表明其对富含碳水化合物环境的适应性。基于ANI和dDDH值的系统发育分析确定KCTC3570为其最接近的亲缘种,表明存在很强的进化关系。此外,该基因组含有次生代谢产物如β-内酯和丰原素的基因簇,表明其在包括生物修复在内的工业和制药应用方面具有潜力。抗生素抗性基因的鉴定,特别是那些赋予糖肽抗性的基因,强调了它们在抗微生物抗性研究中的相关性。淀粉酶和支链淀粉酶等酶的存在进一步强调了其生物技术潜力,特别是在淀粉水解和生物燃料生产方面。总体而言,这项研究突出了该物种作为工业应用中热稳定酶和生物合成途径的宝贵来源的巨大潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b349/12196064/88e8059ff680/microorganisms-13-01374-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验