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组胺受体配体识别及G蛋白偏好性的结构见解

Structural insights into ligand recognition and G protein preferences across histamine receptors.

作者信息

Matsuzaki Yuma, Sano Fumiya K, Oshima Hidetaka S, Akasaka Hiroaki, Kobayashi Kazuhiro, Tanaka Tatsuki, Itoh Yuzuru, Shihoya Wataru, Kise Yoshiaki, Kusakizako Tsukasa, Inoue Asuka, Nureki Osamu

机构信息

Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-Ku, Tokyo, Japan.

Research Center for Advanced Science and Technology, The University of Tokyo, Meguro, Tokyo, Japan.

出版信息

Commun Biol. 2025 Jun 27;8(1):957. doi: 10.1038/s42003-025-08363-7.

DOI:10.1038/s42003-025-08363-7
PMID:40579541
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12205060/
Abstract

Histamine exerts critical physiological roles by activating four receptor subtypes, each exhibiting a specific G protein preference. Among these, the histamine H receptor (HR) modulates chemotaxis and interferon production through G protein activation, suggesting its therapeutic potential. Despite its physiological significance, the mechanisms underlying HR signalling and G protein preference across histamine receptors remain poorly understood. Here, we present the cryo-electron microscopy structure of the HR-G complex, revealing unique mechanisms of histamine recognition and receptor activation. We further solved the structures of the histamine H receptor (HR) bound to the non-canonical G proteins G and G. Through a combination of functional and computational analyses, we identified the intracellular loop 2 as a critical determinant of G protein preference in HR and HR. Collectively, our comprehensive study revealed the structural basis for distinct mechanisms of ligand recognition and receptor activation, offering a profound insight into G protein preference across receptor subtypes.

摘要

组胺通过激活四种受体亚型发挥关键的生理作用,每种亚型都表现出对特定G蛋白的偏好。其中,组胺H受体(HR)通过G蛋白激活调节趋化性和干扰素产生,表明其具有治疗潜力。尽管其具有生理意义,但组胺受体间HR信号传导及G蛋白偏好的潜在机制仍知之甚少。在此,我们展示了HR-G复合物的冷冻电镜结构,揭示了组胺识别和受体激活的独特机制。我们还解析了与非经典G蛋白G和G结合的组胺H受体(HR)的结构。通过功能分析和计算分析相结合,我们确定细胞内环2是HR和HR中G蛋白偏好的关键决定因素。总体而言,我们的综合研究揭示了配体识别和受体激活不同机制的结构基础,为深入了解受体亚型间的G蛋白偏好提供了深刻见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/a0be70674e37/42003_2025_8363_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/f5158681301b/42003_2025_8363_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/ad24e17f7642/42003_2025_8363_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/edf7c5c173dc/42003_2025_8363_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/e4328fb87850/42003_2025_8363_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/a0be70674e37/42003_2025_8363_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/f5158681301b/42003_2025_8363_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/ad24e17f7642/42003_2025_8363_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/edf7c5c173dc/42003_2025_8363_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/e4328fb87850/42003_2025_8363_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f00f/12205060/a0be70674e37/42003_2025_8363_Fig5_HTML.jpg

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本文引用的文献

1
Structural basis of ligand recognition and activation of the histamine receptor family.组胺受体家族配体识别和激活的结构基础。
Nat Commun. 2024 Sep 27;15(1):8296. doi: 10.1038/s41467-024-52585-y.
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Accurate structure prediction of biomolecular interactions with AlphaFold 3.利用 AlphaFold 3 进行生物分子相互作用的精确结构预测。
Nature. 2024 Jun;630(8016):493-500. doi: 10.1038/s41586-024-07487-w. Epub 2024 May 8.
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Molecular Determinant Underlying Selective Coupling of Primary G-Protein by Class A GPCRs.A 类 G 蛋白偶联受体对初级 G 蛋白的选择性偶联的分子决定因素。
Adv Sci (Weinh). 2024 Jun;11(23):e2310120. doi: 10.1002/advs.202310120. Epub 2024 Apr 22.
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Promiscuous G-protein activation by the calcium-sensing receptor.钙敏感受体对 G 蛋白的非选择性激活
Nature. 2024 May;629(8011):481-488. doi: 10.1038/s41586-024-07331-1. Epub 2024 Apr 17.
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Structural basis of ligand recognition and design of antihistamines targeting histamine H receptor.组胺 H 受体配体识别的结构基础及抗组胺药物设计
Nat Commun. 2024 Mar 20;15(1):2493. doi: 10.1038/s41467-024-46840-5.
6
Cryo-EM structure of cell-free synthesized human histamine 2 receptor/G complex in nanodisc environment.无细胞合成的人类组胺 2 受体/G 复合物在纳米盘环境中的冷冻电镜结构
Nat Commun. 2024 Feb 28;15(1):1831. doi: 10.1038/s41467-024-46096-z.
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Allosteric modulation and G-protein selectivity of the Ca-sensing receptor.钙敏感受体的变构调节和 G 蛋白选择性。
Nature. 2024 Feb;626(8001):1141-1148. doi: 10.1038/s41586-024-07055-2. Epub 2024 Feb 7.
8
Structural insights into the agonists binding and receptor selectivity of human histamine H receptor.人源组氨酸 H 受体激动剂结合和受体选择性的结构见解。
Nat Commun. 2023 Oct 20;14(1):6538. doi: 10.1038/s41467-023-42260-z.
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Cell Res. 2023 Aug;33(8):604-616. doi: 10.1038/s41422-023-00808-0. Epub 2023 May 23.
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