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甲基化的ARHGAP40 DNA作为高级别卵巢浆液性癌早期诊断的潜在生物标志物。

Methylated ARHGAP40 DNA as a potential biomarker for early diagnosis in high-grade ovarian serous cancer.

作者信息

Chai Jiaxin, Leng Dongni, Guo Shuwei, Zhang Rusong, Wang Jiandong, Gu Yun, Rao Qiu

机构信息

Department of Pathology, Jinling Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, 210002, China.

Department of Pathology, Nanjing JunXie Hospital, Nanjing, 210002, China.

出版信息

J Ovarian Res. 2025 Jul 2;18(1):140. doi: 10.1186/s13048-025-01729-9.

DOI:10.1186/s13048-025-01729-9
PMID:40605010
Abstract

Ovarian cancer ranks as the eighth most common malignancy in women globally. Early detection remains a critical challenge for improving ovarian cancer diagnosis and treatment outcomes. Our prior study demonstrated that ARHGAP40 downregulation in basal cell carcinoma is attributed to CpG island hypermethylation. However, the expression and methylation status of ARHGAP40 in ovarian cancer remain unexplored. Here, we investigated ARHGAP40 protein expression in normal fallopian tubes, ovarian benign tumors, borderline tumors, low-grade serous carcinoma (LGSC) and high-grade serous carcinomas (HGSC). Methylation analysis of the ARHGAP40 was performed using bisulfite sequencing PCR (BSP). MethyLight assays were developed to detect methylated circulating tumor DNA (ctDNA) fragments of ARHGAP40. IHC results revealed absent or weak ARHGAP40 protein expression in 93.8% (30/32) of HGSC, 11.1% (2/18) of borderline tumors, and in 14.3% (1/7) of LGSC cases. ARHGAP40 protein expression was robust expressed in all normal fallopian tubes (15/15) and benign ovarian tumors (8/8). CpG island hypermethylation in the ARHGAP40 promoter showed a strong inverse correlation with protein expression (P < 0.001). Furthermore, methylated ctDNA for ARHGAP40 was detected in 80.0% (4/5) of HGSC patients' plasma, but not in benign tumor (0/3) and healthy controls (0/15). Our findings suggest that promoter hypermethylation may be a mechanism underlying ARHGAP40 silencing in HGSC. Detection of methylated ARHGAP40 ctDNA may serve as a noninvasive biomarker for early diagnosis and monitoring of HGSC. While our findings suggest the potential of methylated ARHGAP40 as an early diagnostic biomarker, the small sample size warrants validation in larger cohorts.

摘要

卵巢癌是全球女性中第八大常见恶性肿瘤。早期检测仍然是改善卵巢癌诊断和治疗结果的关键挑战。我们之前的研究表明,基底细胞癌中ARHGAP40的下调归因于CpG岛高甲基化。然而,ARHGAP40在卵巢癌中的表达和甲基化状态仍未得到探索。在此,我们研究了ARHGAP40蛋白在正常输卵管、卵巢良性肿瘤、交界性肿瘤、低级别浆液性癌(LGSC)和高级别浆液性癌(HGSC)中的表达情况。使用亚硫酸氢盐测序PCR(BSP)对ARHGAP40进行甲基化分析。开发了甲基化荧光定量分析方法来检测ARHGAP40的甲基化循环肿瘤DNA(ctDNA)片段。免疫组化结果显示,93.8%(30/32)的HGSC、11.1%(2/18)的交界性肿瘤以及14.3%(1/7)的LGSC病例中ARHGAP40蛋白表达缺失或微弱。ARHGAP40蛋白在所有正常输卵管(15/15)和卵巢良性肿瘤(8/8)中均有强烈表达。ARHGAP40启动子中的CpG岛高甲基化与蛋白表达呈强烈负相关(P < 0.001)。此外,在80.0%(4/5)的HGSC患者血浆中检测到了ARHGAP40的甲基化ctDNA,但在良性肿瘤(0/3)和健康对照(0/15)中未检测到。我们的研究结果表明,启动子高甲基化可能是HGSC中ARHGAP40沉默的潜在机制。检测甲基化的ARHGAP40 ctDNA可作为HGSC早期诊断和监测的非侵入性生物标志物。虽然我们的研究结果表明甲基化的ARHGAP40作为早期诊断生物标志物具有潜力,但样本量较小,需要在更大的队列中进行验证。

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本文引用的文献

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BRCA1 Promoter Methylation in Ovarian Cancer: Clinical Relevance and a Novel Diagnostic Approach Using Fragment Analysis.卵巢癌中BRCA1启动子甲基化:临床相关性及一种使用片段分析的新型诊断方法
Cancer Sci. 2025 Apr 9. doi: 10.1111/cas.70078.
2
Genome-wide cell-free DNA methylation profiling in advanced stage ovarian cancer. Are we looking at the tumor or the patient's immune response to the tumor?晚期卵巢癌的全基因组游离DNA甲基化分析。我们看到的是肿瘤本身还是患者对肿瘤的免疫反应?
Cancer Treat Res Commun. 2025;43:100903. doi: 10.1016/j.ctarc.2025.100903. Epub 2025 Mar 22.
3
Dynamic ctDNA informs whole-course postoperative precise management of NSCLC (LUNGCA study).
动态循环肿瘤DNA指导非小细胞肺癌术后全程精准管理(LUNGCA研究)
J Natl Cancer Inst. 2025 Jul 1;117(7):1474-1484. doi: 10.1093/jnci/djaf061.
4
ctDNA variations according to treatment intensity in first-line metastatic colorectal cancer.一线转移性结直肠癌中根据治疗强度的循环肿瘤DNA变异情况
Br J Cancer. 2025 May;132(9):814-821. doi: 10.1038/s41416-025-02971-0. Epub 2025 Mar 15.
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Prognostic value of assessing ctDNA in patients with endometrial carcinoma - an international multicenter study.评估子宫内膜癌患者循环肿瘤DNA的预后价值——一项国际多中心研究
Gynecol Oncol. 2025 Apr;195:98-105. doi: 10.1016/j.ygyno.2025.03.002. Epub 2025 Mar 12.
6
Breast tumors from ATM pathogenic variant carriers display a specific genome-wide DNA methylation profile.携带ATM致病变体的乳腺癌患者的肿瘤呈现出特定的全基因组DNA甲基化谱。
Breast Cancer Res. 2025 Mar 11;27(1):36. doi: 10.1186/s13058-025-01988-w.
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The Role of CA-125 in the Management of Ovarian Cancer: A Systematic Review.CA-125在卵巢癌管理中的作用:一项系统评价。
Cancer Rep (Hoboken). 2025 Mar;8(3):e70142. doi: 10.1002/cnr2.70142.
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Development of a prediction model for ctDNA detection (Cir-Predict) in breast cancer.乳腺癌中循环肿瘤DNA检测预测模型(Cir-Predict)的开发。
Breast Cancer Res Treat. 2025 Jun;211(2):331-339. doi: 10.1007/s10549-025-07647-0. Epub 2025 Mar 7.
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