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新型1,2,3-三唑-硫代半卡巴腙的合成、分子结构、光谱、电子性质、分子对接和分子动力学研究:一种有效的乳腺癌药物。

Synthesis, molecular structure, spectroscopic, electronic properties, molecular docking, and molecular dynamics studies on novel 1,2,3-triazole-thiosemicarbazone: A potent breast cancer drug.

作者信息

Ait Elmachkouri Younesse, Rajesh R, Altharawi Ali, Frit A Alfind Paul, Alossaimi Manal A, Riadi Yassine, Aldakhil Taibah, Taha Mohamed Labd, Haggam Reda A

机构信息

Laboratory of Organic and physical Chemistry, Applied Bioorganic Chemistry Team, Faculty of Sciences, Ibnou Zohr University, Agadir, Morocco.

Department of Physics, Vel Tech High Tech Dr.Rangarajan Dr.Sakunthala Engineering College, Avadi, Chennai, Tamil Nadu 600 062, India.

出版信息

Comput Biol Chem. 2025 Dec;119:108580. doi: 10.1016/j.compbiolchem.2025.108580. Epub 2025 Jul 2.

DOI:10.1016/j.compbiolchem.2025.108580
PMID:40617050
Abstract

This paper reports a comprehensive multi-step synthesis, characterization using various analytical techniques, and theoretical analysis of a novel hybrid 1,2,3-Triazole-Thiosemicarbazones compound 5. The structure of the 1,2,3-triazole-thiosemicarbazone 5 was confirmed through detailed analyses such as NMR (H and C), IR, and UV techniques. Also, a Density Functional theory (DFT) investigation was carried out on compound 5 to support experimental results by utilizing the B3LYP approach with the 6-311 + +G(d,p) basis set. The observed FT-IR NMR, and UV-Vis spectra match well with the simulated spectra. The electronic transition happened between n → π*. The stability of the compound is analyzed by NBO. Various chemical parameters were obtained using Frontier Molecular Orbital analysis and confirmed the presence of intermolecular charge transfer (ICT). The qualitative studies of reactive sites are obtained by Molecular Electrostatic Potential. Using DFT theory NLO studies carried out. The topological studies like ELF and LOL carried on the compound to know the electron density and binding nature around an atom. The weak interactions are identified by non-covalent interactions (NCI) and RDG. Furthermore, in-silico molecular docking and dynamics simulations were carried out, complemented by ADMET predictions to assess interactions between this derivative and the active sites of ESR1 (Estrogen Receptor Alpha) after a pharmacological network study. The findings demonstrated strong binding affinity of the synthesized 1,2,3-triazole-thiosemicarbazone hybrid with ESR1, displaying a binding energy score of -6.48 Kcal mol, and also confirmed the notable stability of the complex through molecular dynamics studies.

摘要

本文报道了一种新型杂化1,2,3-三唑-硫代氨基脲化合物5的多步综合合成、使用各种分析技术进行的表征以及理论分析。通过NMR(氢和碳)、IR和UV等详细分析技术确定了1,2,3-三唑-硫代氨基脲5的结构。此外,利用密度泛函理论(DFT)对化合物5进行了研究,采用B3LYP方法和6-311++G(d,p)基组来支持实验结果。观察到的FT-IR、NMR和UV-Vis光谱与模拟光谱匹配良好。电子跃迁发生在n→π*之间。通过NBO分析了化合物的稳定性。利用前线分子轨道分析获得了各种化学参数,并证实了分子间电荷转移(ICT)的存在。通过分子静电势获得了反应位点的定性研究。利用DFT理论进行了NLO研究。对该化合物进行了ELF和LOL等拓扑研究,以了解原子周围的电子密度和键合性质。通过非共价相互作用(NCI)和RDG识别了弱相互作用。此外,在药理学网络研究后,进行了计算机辅助分子对接和动力学模拟,并辅以ADMET预测,以评估该衍生物与ESR1(雌激素受体α)活性位点之间的相互作用。研究结果表明,合成的1,2,3-三唑-硫代氨基脲杂化物与ESR1具有很强的结合亲和力,结合能评分为-6.48千卡/摩尔,并且通过分子动力学研究也证实了该配合物具有显著的稳定性。

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