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通过研究猴痘病毒膜糖蛋白设计肽疫苗:一种综合的计算机模拟和免疫信息学方法

Designing of Peptide Vaccine by Investigating Monkeypox Virus Membrane Glycoprotein: An Integrated In Silico and Immunoinformatics Approach.

作者信息

Mishra Saurav Kumar, Priya Prerna, Basit Abdul, Krishna Nikita, Akash Shopnil, Dawoud Turki M, Bourhia Mohammed, Georrge John J

机构信息

Department of Bioinformatics, University of North Bengal, Siliguri, 734013, District-Darjeeling, West Bengal, India.

Department of Botany, Purnea Mahila Mahavidyalaya, Purnia, 854301, Bihar, India.

出版信息

Curr Med Chem. 2025 Jul 9. doi: 10.2174/0109298673374742250327041841.

Abstract

BACKGROUND

In 2022, the World Health Organisation (WHO) announced new cases of the developing Monkeypox Virus (MPXV), a zoonotic orthopoxvirus viral infection that mimics smallpox signs. Despite the ongoing infection, no proper medication is available to completely overcome this infection.

AIM

The study aims to construct a multi-epitope vaccine targeting Monkeypox Virus (MPXV) membrane glycoprotein to provoke robust immune responses.

OBJECTIVE

To construct a potential immuno-dominant epitope vaccine to combat MPXV.

METHODS

The target sequence, sourced from the UAE-to-India travel case, was analyzed to identify potential B-cell and T-cell epitopes (MHC-I and MHC-II). Immunodominant epitopes were selected and fused with β-defensin-I and PADRE to increase immunogenicity. The vaccine was modeled, docked with TLR3, and subjected to a 500 ns molecular dynamics simulation for stability analysis. Immune responses and bacterial expression were also evaluated.

RESULTS

The vaccine, comprising 230 amino acids, demonstrated antigenicity (0.6620), non-allergenicity, and broad population coverage. Selected epitopes included 3 B-cells, 4 MHC-I, and 2 MHC-II, ensuring a potent immunodominant profile. Docking with TLR3 revealed a binding affinity of -17.2 kcal/mol, while simulations confirmed their stability. Cloning (pET28a (+)) and immune response analyses showed a strong immunogenic profile, including elevated IgG1, IgM, and antigen levels, supported by a Codon Adaptation Index (CAI) of 1.0.

CONCLUSION

The proposed multi-epitope vaccine shows promise against MPXV. However, further in vivo and in vitro investigations are essential to confirm its immune efficacy.

摘要

背景

2022年,世界卫生组织(WHO)宣布了新型猴痘病毒(MPXV)感染病例,猴痘病毒是一种人畜共患的正痘病毒感染,其症状类似天花。尽管感染仍在持续,但目前尚无能够完全战胜这种感染的合适药物。

目的

本研究旨在构建一种针对猴痘病毒(MPXV)膜糖蛋白的多表位疫苗,以激发强烈的免疫反应。

目标

构建一种潜在的免疫优势表位疫苗来对抗猴痘病毒。

方法

对源自阿联酋至印度旅行病例的目标序列进行分析,以鉴定潜在的B细胞和T细胞表位(MHC-I和MHC-II)。选择免疫优势表位,并与β-防御素-I和PADRE融合以增强免疫原性。对该疫苗进行建模,与TLR3对接,并进行500纳秒的分子动力学模拟以进行稳定性分析。还评估了免疫反应和细菌表达情况。

结果

该疫苗由230个氨基酸组成,具有抗原性(0.6620)、无致敏性且具有广泛的人群覆盖率。所选表位包括3个B细胞表位、4个MHC-I表位和2个MHC-II表位,确保了强大的免疫优势特征。与TLR3对接显示结合亲和力为-17.2千卡/摩尔,同时模拟结果证实了它们的稳定性。克隆(pET28a(+))和免疫反应分析显示出强烈的免疫原性特征,包括IgG-1、IgM和抗原水平升高,密码子适应指数(CAI)为1.0。

结论

所提出的多表位疫苗显示出对抗猴痘病毒的潜力。然而,进一步的体内和体外研究对于确认其免疫效果至关重要。

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