Pavelich Ian J, Schureck Marc A, Srinivas Pooja, Blackburn Taylor M, Wang Dongxue, Hoffer Eric D, Boamah Michelle, Zaldana Kimberly, Onuoha Nina, Miles Stacey J, Grabowicz Marcin, Okafor C Denise, Dunham Christine M
Department of Chemistry and the Emory Antibiotic Resistance Center, Emory University, Atlanta, GA 30322, United States.
Biochemistry, Cell and Developmental Biology Graduate Program, Emory University, Atlanta, GA 30322, United States.
Nucleic Acids Res. 2025 Jul 8;53(13). doi: 10.1093/nar/gkaf610.
Bacterial toxin-antitoxin (TA) pairs transcriptionally autoregulate their expression via a repression/derepression mechanism in response to changing environmental conditions. The structural diversity of TA systems influences the mechanisms of transcriptional regulation. Here, we define the molecular mechanism for the plasmid-encoded HigB-HigA TA pair originally identified in a post-operative infection with antibiotic-resistant Proteus vulgaris. We determine DNA binding and promoter activity by the HigB-HigA complex supported by structural biology and molecular dynamics simulations of an elusive DNA operator-TA repressor complex. To define the optimal oligomeric TA repressor-DNA operator complex required for derepression, we engineered a dedicated trimeric HigB-HigA2 complex that represses transcription more than 26-fold as compared to the tetrameric HigB2-HigA2. These results expand the known diversity of how the HigB-HigA TA family is autoregulated.
细菌毒素-抗毒素(TA)对通过一种阻遏/去阻遏机制对转录进行自我调控,以响应不断变化的环境条件。TA系统的结构多样性影响转录调控机制。在此,我们确定了最初在耐抗生素普通变形杆菌术后感染中鉴定出的质粒编码HigB-HigA TA对的分子机制。我们通过结构生物学以及难以捉摸的DNA操纵子-TA阻遏物复合物的分子动力学模拟,确定了HigB-HigA复合物的DNA结合和启动子活性。为了确定去阻遏所需的最佳寡聚TA阻遏物-DNA操纵子复合物,我们构建了一种专用的三聚体HigB-HigA2复合物,与四聚体HigB2-HigA2相比,其对转录的抑制作用高出26倍以上。这些结果扩展了已知的HigB-HigA TA家族自我调控方式的多样性。