PARP1在急性DNA甲基化损伤后促进非复制依赖性DNA双链断裂的形成。

PARP1 promotes replication-independent DNA double-strand break formation after acute DNA-methylation damage.

作者信息

McMahon Anne Marie, Zhao Haichao, Li Jia, Driscoll Garrett, Matos Joshua, McGhee Kelly, Lyttle Jade, Yan Shan

机构信息

Department of Biological Sciences, Klein College of Science, University of North Carolina at Charlotte, Charlotte, NC 28223, USA.

LPresent Address: Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

出版信息

bioRxiv. 2025 Jul 12:2025.07.10.663928. doi: 10.1101/2025.07.10.663928.

Abstract

Poly-ADP-Ribose Polymerase 1 (PARP1) is a potent regulator of DNA damage response signaling through the recruitment of DNA damage repair proteins to damage sites, and its catalytic function of converting Nicotinamide adenine dinucleotide (NAD) into poly-ADP-ribose (PAR) which covalently modifies hundreds of protein substrates in a process known as PARylation. However, PARP1's role in the recognition, processing, and intracellular signaling downstream of DNA damage in cells remains incompletely understood, especially in a replication-independent context. Here, we show that cells exposed to high doses of the methylating agent Methyl Methanesulfonate (MMS) generate DNA double-strand breaks (DSBs) in a base excision repair (BER)-dependent and DNA replication-independent manner. The capacity of cells to generate DSBs after MMS exposure relies heavily on intracellular NAD availability and PARP1's catalytic production of PAR. In our experimental system, we show that acute MMS exposure causes NAD exhaustion in a PARP1-dependent manner, which results in a temporal-dependent loss of downstream PARP1 activity. This functional loss of PARP1 signaling in later timepoints leads to the loss of BER-dependent single-strand break (SSB)-to-DSB conversion, as well as silencing of ATR-Chk1 signaling in both cycling and non-cycling cells, demonstrating a novel PARP1-dependent regulatory mechanism for both ATR-Chk1 signaling and BER-associated processes following methylation challenge. Additionally, we provide experimental evidence supporting the role of PARP1 and NAD in promoting the exonuclease-mediated SSB-to-DSB conversion. These findings support a previously uncharacterized mechanism of PARP1-mediated replication-independent DSB generation and provide insight into checkpoint signaling by integrating DDR with PARP1's consumption of NAD and production of PAR.

摘要

聚(ADP - 核糖)聚合酶1(PARP1)是DNA损伤反应信号传导的有效调节因子,它通过将DNA损伤修复蛋白招募到损伤位点来发挥作用,其催化功能是将烟酰胺腺嘌呤二核苷酸(NAD)转化为聚(ADP - 核糖)(PAR),在一个称为PAR化的过程中对数百种蛋白质底物进行共价修饰。然而,PARP1在细胞中DNA损伤的识别、处理及下游细胞内信号传导中的作用仍未完全明确,尤其是在不依赖复制的情况下。在此,我们表明,暴露于高剂量甲基化剂甲磺酸甲酯(MMS)的细胞以碱基切除修复(BER)依赖且不依赖DNA复制的方式产生DNA双链断裂(DSB)。细胞在MMS暴露后产生DSB的能力在很大程度上依赖于细胞内NAD的可用性以及PARP1催化产生PAR的能力。在我们的实验系统中,我们表明急性MMS暴露以PARP1依赖的方式导致NAD耗竭,这导致下游PARP1活性随时间依赖性丧失。PARP1信号在后期时间点的这种功能丧失导致BER依赖的单链断裂(SSB)到DSB转化的丧失,以及在循环和非循环细胞中ATR - Chk1信号的沉默,这证明了甲基化挑战后ATR - Chk1信号传导和BER相关过程存在一种新的PARP1依赖调节机制。此外,我们提供了实验证据支持PARP1和NAD在促进核酸外切酶介导的SSB到DSB转化中的作用。这些发现支持了一种先前未被描述的PARP1介导的不依赖复制的DSB产生机制,并通过将DNA损伤反应(DDR)与PARP1对NAD的消耗和PAR的产生相结合,为检查点信号传导提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e776/12265532/942e12a2813a/nihpp-2025.07.10.663928v1-f0001.jpg

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