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与青少年起病的颞叶癫痫相关的新发变异且预后良好。

De Novo Variant Associated With Juvenile-Onset Temporal Lobe Epilepsy With Favorable Outcomes.

作者信息

Yan Hong-Jun, Wang Peng-Yu, Liu Wen-Hui, Gu Yu-Jie, Pan Jia-Cheng, Li Hua, Luo Sheng

机构信息

Epilepsy Center, Guangdong Sanjiu Brain Hospital, Guangzhou, Guangdong, China.

Institute of Neuroscience, Key Laboratory of Neurogenetics and Channelopathies of Guangdong Province and the Ministry of Education of China, The Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, Guangdong, China.

出版信息

Hum Mutat. 2025 Feb 12;2025:9951922. doi: 10.1155/humu/9951922. eCollection 2025.

DOI:10.1155/humu/9951922
PMID:40677923
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12267973/
Abstract

Genetic factors are estimated to contribute to 80% of people with epilepsy. However, only four genes were reported to be associated with temporal lobe epilepsy (TLE). This study is aimed at investigating the association between and TLE. Trio-based exome sequencing was performed in a patient, and a de novo variant was identified. The patient presented with TLE featuring by age of onset in juvenile, seizure-free status in adulthood, complications of memory decline and irritability, epileptic discharges in the bilateral temporal lobes, and bilateral hippocampal sclerosis. The pathogenicity of the identified variant was supposed by multiple pieces of evidence, including the missense tolerance ratio of 0%, high conservation of the affected residue, predicted to be "damaging" or "conserved" by 17 in silico tools, and classification of likely pathogenic variant by the American College of Medical Genetics and Genomics (ACMG) guidelines. Protein modeling indicated the alteration of protein structure and stability caused by the identified variant. The spatiotemporal expression of is consistent with the phenotypic features of this patient. This study suggested that is a novel candidate causative gene of TLE. The correlation between phenotypes and spatial-temporal expression provides a novel perspective for further exploration of the pathogenesis and prognosis of the disease.

摘要

据估计,80%的癫痫患者受遗传因素影响。然而,仅有四个基因被报道与颞叶癫痫(TLE)相关。本研究旨在探究[基因名称]与TLE之间的关联。对一名患者进行了基于三联体的外显子组测序,并鉴定出一个新生的[基因名称]变异。该患者表现为青少年起病的TLE,成年期无癫痫发作,伴有记忆衰退和易怒等并发症,双侧颞叶有癫痫放电,以及双侧海马硬化。通过多项证据推测所鉴定的[基因名称]变异具有致病性,包括错义耐受率为0%、受影响残基的高度保守性、17种计算机模拟工具预测为“有害”或“保守”,以及根据美国医学遗传学与基因组学学会(ACMG)指南分类为可能的致病变异。蛋白质建模表明所鉴定的变异导致了蛋白质结构和稳定性的改变。[基因名称]的时空表达与该患者的表型特征一致。本研究提示[基因名称]是TLE的一个新的候选致病基因。表型与时空表达之间的相关性为进一步探索该疾病的发病机制和预后提供了新的视角。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/9d0527204f11/HUMU2025-9951922.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/80972e10649c/HUMU2025-9951922.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/45102aa3e68d/HUMU2025-9951922.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/02584eabcb56/HUMU2025-9951922.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/83a6e99f6bf4/HUMU2025-9951922.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/9d0527204f11/HUMU2025-9951922.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/80972e10649c/HUMU2025-9951922.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/45102aa3e68d/HUMU2025-9951922.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/02584eabcb56/HUMU2025-9951922.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/83a6e99f6bf4/HUMU2025-9951922.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5848/12267973/9d0527204f11/HUMU2025-9951922.005.jpg

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本文引用的文献

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SLC2A1 variants cause late-onset epilepsy and the genetic-dependent stage feature : For the China Epilepsy Gene 1.0 Project.SLC2A1基因变异导致迟发性癫痫及遗传依赖性阶段特征:针对中国癫痫基因1.0项目
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Variants in EP400, encoding a chromatin remodeler, cause epilepsy with neurodevelopmental disorders.编码一种染色质重塑因子的EP400基因变异会导致伴有神经发育障碍的癫痫。
Am J Hum Genet. 2025 Jan 2;112(1):87-105. doi: 10.1016/j.ajhg.2024.11.010. Epub 2024 Dec 20.
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CCDC22 variants caused X-linked focal epilepsy and focal cortical dysplasia.
CCDC22基因变异导致X连锁局灶性癫痫和局灶性皮质发育不良。
Seizure. 2024 Dec;123:1-8. doi: 10.1016/j.seizure.2024.10.007. Epub 2024 Oct 12.
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variants caused X-linked epilepsy with/without neurodevelopmental disorders and the genotype-phenotype correlation.变异导致伴或不伴神经发育障碍的X连锁癫痫及基因型-表型相关性。
Front Mol Neurosci. 2024 Jan 5;16:1290919. doi: 10.3389/fnmol.2023.1290919. eCollection 2023.
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Epilepsy-associated genes: an update.癫痫相关基因:最新进展
Seizure. 2024 Mar;116:4-13. doi: 10.1016/j.seizure.2023.09.021. Epub 2023 Sep 23.
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Expanding the phenotypic spectrum of : From syndromic neurodevelopmental disorder to rolandic epilepsy.扩展 的表型谱:从综合征性神经发育障碍到罗兰多癫痫。 (注:原文中“Expanding the phenotypic spectrum of”后面似乎缺少具体内容)
Front Mol Neurosci. 2023 Jan 5;15:1081097. doi: 10.3389/fnmol.2022.1081097. eCollection 2022.
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Structural basis underlying specific biochemical activities of non-muscle tropomyosin isoforms.非肌肉原肌球蛋白亚型特定生化活性的结构基础。
Cell Rep. 2023 Jan 31;42(1):111900. doi: 10.1016/j.celrep.2022.111900. Epub 2022 Dec 30.
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CELSR1 variants are associated with partial epilepsy of childhood.CELSR1基因变异与儿童部分性癫痫有关。
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The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest.2023 年的 STRING 数据库:针对任何感兴趣的测序基因组的蛋白质-蛋白质关联网络和功能富集分析。
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BCOR variants are associated with X-linked recessive partial epilepsy.BCOR 变异与 X 连锁隐性部分性癫痫有关。
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