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人铁转运蛋白两个金属结合位点的不同亲和力驱动了转运的外向方向性。

The different affinity of the two metal-binding sites of human ferroportin drives outward directionality of transport.

作者信息

Amadei Matteo, De Lauro Alfredo, Polticelli Fabio, Musci Giovanni, Bonaccorsi di Patti Maria Carmela

机构信息

Department of Biochemical Sciences 'A. Rossi Fanelli', Sapienza University of Rome, Rome, Italy.

Department of Sciences, University Roma Tre, Rome, Italy.

出版信息

Biometals. 2025 Jul 21. doi: 10.1007/s10534-025-00725-2.

DOI:10.1007/s10534-025-00725-2
PMID:40690080
Abstract

Ferroportin, the only known cellular iron exporter, belongs to the major facilitator superfamily of transporters, which cycle between inward-open, occluded and outward-open conformations to translocate substrates across membranes. Recently reported cryoEM structures of ferroportin identified two metal-binding sites in the central cavity of the protein, with site S1 that includes residues D39 and H43, while site S2 is formed by C326 and H507. Here we have employed fluorescence spectroscopy to evaluate the binding affinity for cobalt of human ferroportin. The results suggest that S2 has a higher affinity for cobalt than S1. Results are discussed in view of available structural data on the outward-open conformation of Fpn and of a novel structural model of the inward-open conformation, obtained with a custom implementation of AlphaFold 2. We propose a mechanism by which the outward flux of iron could be driven by the different affinity of the two sites.

摘要

铁转运蛋白是唯一已知的细胞内铁输出蛋白,属于转运蛋白的主要易化子超家族,该家族在向内开放、封闭和向外开放构象之间循环,以跨膜转运底物。最近报道的铁转运蛋白的冷冻电镜结构在蛋白质的中央腔中确定了两个金属结合位点,位点S1包括残基D39和H43,而位点S2由C326和H507形成。在这里,我们采用荧光光谱法评估人铁转运蛋白对钴的结合亲和力。结果表明,S2对钴的亲和力高于S1。结合铁转运蛋白向外开放构象的现有结构数据以及通过AlphaFold 2的定制实现获得的向内开放构象的新结构模型,对结果进行了讨论。我们提出了一种机制,即两个位点的不同亲和力可以驱动铁的外向通量。

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本文引用的文献

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The Ferroxidase-Permease System for Transport of Iron Across Membranes: From Yeast to Humans.用于铁跨膜转运的铁氧化酶-通透酶系统:从酵母到人类
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Predicting multiple conformations via sequence clustering and AlphaFold2.通过序列聚类和AlphaFold2预测多种构象
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Mechanisms controlling cellular and systemic iron homeostasis.控制细胞和全身铁稳态的机制。
Nat Rev Mol Cell Biol. 2024 Feb;25(2):133-155. doi: 10.1038/s41580-023-00648-1. Epub 2023 Oct 2.
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Genetic Incorporation of Dansylalanine in Human Ferroportin to Probe the Alternating Access Mechanism of Iron Transport.在人类铁蛋白中遗传掺入丹磺酰丙氨酸以探测铁运输的交替访问机制。
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Structures of ferroportin in complex with its specific inhibitor vamifeport.与特定抑制剂沃米夫单抗复合物中铁转运蛋白的结构。
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Structural basis of ferroportin inhibition by minihepcidin PR73.PR73 小肝素有抑制亚铁转运蛋白的结构基础。
PLoS Biol. 2023 Jan 17;21(1):e3001936. doi: 10.1371/journal.pbio.3001936. eCollection 2023 Jan.
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Mechanism of Ca transport by ferroportin.铁蛋白通过铁蛋白转运蛋白进行钙转运的机制。
Elife. 2023 Jan 17;12:e82947. doi: 10.7554/eLife.82947.
8
A computational study of the structure and function of human Zrt and Irt-like proteins metal transporters: An elevator-type transport mechanism predicted by AlphaFold2.人类Zrt和Irt样蛋白金属转运体的结构与功能的计算研究:由AlphaFold2预测的电梯式转运机制
Front Chem. 2022 Sep 20;10:1004815. doi: 10.3389/fchem.2022.1004815. eCollection 2022.
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ColabFold: making protein folding accessible to all.ColabFold:让蛋白质折叠变得人人可用。
Nat Methods. 2022 Jun;19(6):679-682. doi: 10.1038/s41592-022-01488-1. Epub 2022 May 30.
10
Sampling alternative conformational states of transporters and receptors with AlphaFold2.使用 AlphaFold2 采样转运体和受体的替代构象状态。
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