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探寻小窝蛋白8S复合物的膜结合结构。

Seeking the Membrane-Bound Structure of the Caveolin 8S Complex.

作者信息

Vasquez Rodriguez Sayyid Yobhel, Lazaridis Themis

机构信息

Biology Senior, CCNY Undergraduate Program, New York, New York 10031, United States.

Department of Chemistry, City College of New York/CUNY, 160 Convent Avenue, New York, New York 10031, United States.

出版信息

J Phys Chem B. 2025 Aug 7;129(31):7932-7938. doi: 10.1021/acs.jpcb.5c01585. Epub 2025 Jul 25.

Abstract

The protein caveolin-1 (CAV1) is essential in the generation of caveolae, cup-like invaginations in the plasma membrane, but the mechanism of its action remains unclear. A recent cryo-EM structure showed an 11-mer of CAV1 (the 8S complex) forming a disk with a flat membrane-facing surface, raising the question of how a flat complex can generate membrane curvature. We previously conducted implicit-solvent molecular dynamics simulations, which showed the 8S complex adopting a conical shape with its outer ridge deep inside the implicit membrane. These results suggested a scaffolding-type mechanism for the generation of curvature by the 8S complex. In this work, we aimed to validate this proposal via all-atom simulations. To date, all simulations (other than in a vacuum) show the complex taking a conical shape. The arrangement of the lipids around the complex depends on the starting configuration. Starting on top of the bilayer leads to lipid extraction and trapped water molecules between the 8S complex and the bilayer, creating a protrusion on the distal leaflet. Starting deep inside the bilayer, displacing the proximal leaflet leads to a more plausible configuration with the distal leaflet lipids adsorbed onto the 8S concave surface. Further work is needed to characterize the determinants of 8S shape and its membrane curvature generating capabilities as well as the role of lipid composition.

摘要

蛋白质小窝蛋白-1(CAV1)对于质膜中杯状内陷结构小窝的形成至关重要,但其作用机制仍不清楚。最近的冷冻电镜结构显示,11聚体的CAV1(8S复合物)形成了一个盘状结构,其面向膜的表面是平的,这就引发了一个问题:一个扁平的复合物如何产生膜曲率。我们之前进行了隐式溶剂分子动力学模拟,结果显示8S复合物呈圆锥形,其外脊深入到隐式膜内部。这些结果表明8S复合物通过一种支架型机制产生曲率。在这项工作中,我们旨在通过全原子模拟验证这一推测。迄今为止,所有模拟(除了在真空中)都显示该复合物呈圆锥形。复合物周围脂质的排列取决于起始构型。从双层膜顶部开始会导致脂质提取以及8S复合物与双层膜之间截留水分子,从而在远端小叶上形成一个突起。从双层膜内部深处开始,使近端小叶移位会导致一种更合理的构型,远端小叶脂质吸附在凹面的8S复合物上。还需要进一步的工作来表征8S形状的决定因素及其产生膜曲率能力以及脂质组成的作用。

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