Lee Christopher T, Venkatraman Kailash, Budin Itay, Rangamani Padmini
Department of Molecular Biology, University of California, San Diego, San Diego, California.
Department of Chemistry and Biochemistry, University of California, San Diego, San Diego, California.
Biophys J. 2025 Jun 25. doi: 10.1016/j.bpj.2025.06.025.
Organelles such as mitochondria have characteristic shapes that are critical to their function. Recent efforts have revealed that the curvature contributions of individual lipid species can be a factor in the generation of membrane shape in these organelles. Inspired by lipidomics data from yeast mitochondrial membranes, we used Martini coarse-grained molecular dynamics simulations to investigate how lipid composition facilitates membrane shaping. We found that increasing lipid saturation increases bending rigidity while reducing the monolayer spontaneous curvature. We also found that systems containing cardiolipin exhibited decreased bending rigidity and increased spontaneous curvature when compared with bilayers containing its precursor, phosphatidylglycerol. This finding contradicts some prior experimental results that suggest that bilayers containing tetraoleoyl cardiolipin have greater rigidity than dioleoyl phosphatidylcholine bilayers. To investigate this discrepancy, we analyzed our simulations for correlations between lipid localization and local curvature. We found that there are transient correlations between curved lipids, such as cardiolipin and phosphatidylethanolamine, and curvature; these interactions enrich specific bilayer undulatory modes and cause bilayer softening. Furthermore, we show that curvature localization of some lipids such as cardiolipin can influence lipids in the opposing leaflet. These observations add to the emerging evidence that lipid geometric features give rise to local interactions, which can cause membrane compositional heterogeneities. The cross talk between composition-driven tuning of membrane properties and membrane shape has implications for membrane organization and its related functions.
线粒体等细胞器具有对其功能至关重要的特征形状。最近的研究表明,单个脂质种类的曲率贡献可能是这些细胞器中膜形状形成的一个因素。受酵母线粒体膜脂质组学数据的启发,我们使用马尔蒂尼粗粒度分子动力学模拟来研究脂质组成如何促进膜的塑形。我们发现,增加脂质饱和度会增加弯曲刚度,同时降低单层自发曲率。我们还发现,与含有其前体磷脂酰甘油的双层膜相比,含有心磷脂的系统弯曲刚度降低,自发曲率增加。这一发现与一些先前的实验结果相矛盾,那些实验结果表明含有四油酰心磷脂的双层膜比二油酰磷脂酰胆碱双层膜具有更大的刚度。为了研究这种差异,我们分析了模拟中脂质定位与局部曲率之间的相关性。我们发现,弯曲的脂质(如心磷脂和磷脂酰乙醇胺)与曲率之间存在瞬时相关性;这些相互作用丰富了特定的双层波动模式并导致双层膜软化。此外,我们表明,一些脂质(如心磷脂)的曲率定位可以影响相对小叶中的脂质。这些观察结果进一步证明了脂质几何特征会引发局部相互作用,进而导致膜成分的异质性。膜性质的组成驱动调节与膜形状之间的相互作用对膜组织及其相关功能具有重要意义。