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建立基于CRISPR/Cas12b的多重交叉置换扩增检测法用于快速、灵敏且特异的检测…… (原文未完整给出检测对象)

Establishment of a CRISPR/Cas12b-Based Multiple Cross Displacement Amplification Assay for the Rapid, Sensitive, and Specific Detection of .

作者信息

Zhang Yue, Yang Xinggui, Wang Yue, Chen Fengming, Liu Ying, Jiang Hai, Wang Yi, Hu Yong, Li Shijun

机构信息

The Key Laboratory of Environmental Pollution Monitoring and Disease Control, Ministry of Education, School of Public Health, Guizhou Medical University, Guiyang 561113, Guizhou, China.

Guizhou Provincial Center for Disease Control and Prevention, Guiyang 550004, Guizhou, China.

出版信息

ACS Infect Dis. 2025 Sep 12;11(9):2446-2456. doi: 10.1021/acsinfecdis.5c00287. Epub 2025 Aug 1.

Abstract

(), a major pathogenic species within the genus, causes ovine epididymitis. Although the isolation and identification of remain the gold standard for diagnosis, these methods are unsuitable for early detection. The traditional polymerase chain reaction (PCR) offers faster detection but requires specialized equipment such as PCR thermal cyclers and gel electrophoresis imagers, limiting its use in basic laboratories. Thus, developing rapid, sensitive, and specific diagnostic strategies is vital for preventing and controlling the spread of ovine brucellosis. In this study, we developed a diagnostic assay combining clustered regularly interspaced short palindromic repeats (CRISPR)/Cas12b with multiple cross displacement amplification (MCDA)─termed CRISPR/Cas12b-MCDA─for rapid, sensitive, and specific identification of . In the CRISPR/Cas12b-MCDA system, MCDA amplicons containing protospacer adjacent motif (PAM) sites are recognized by the Cas12b/gRNA complex, which binds the target region and triggers -cleavage of a single-stranded DNA (ssDNA) reporter. The CRISPR/Cas12b-MCDA assay demonstrated a detection limit of 10 fg/μL for synthetic genomic DNA and exhibited 100% specificity for , with no cross-reactivity against other or non- species. The preamplification for template extraction takes 20 min, then 5 min for uracil DNA glycosylase (UDG) digestion, and 45 min for MCDA amplification. The total detection time was 75 min using real-time fluorescence analysis and 90 min with a lateral flow biosensor (LFB). Additionally, the results were validated using UV visualization to confirm the CRISPR/Cas12b-MCDA results. Notably, both LFB and UV analyses are instrument-free, enhancing their accessibility. In conclusion, the CRISPR/Cas12b-MCDA assay is a simple, rapid, sensitive, specific, and reliable method for detecting .

摘要

(某菌)是该属内的一种主要致病菌种,可引起绵羊附睾炎。尽管该菌的分离和鉴定仍是诊断的金标准,但这些方法不适用于早期检测。传统的聚合酶链反应(PCR)检测速度更快,但需要PCR热循环仪和凝胶电泳成像仪等专业设备,限制了其在基层实验室的应用。因此,开发快速、灵敏且特异的诊断策略对于预防和控制绵羊布鲁氏菌病的传播至关重要。在本研究中,我们开发了一种将成簇规律间隔短回文重复序列(CRISPR)/Cas12b与多重交叉置换扩增(MCDA)相结合的诊断检测方法——称为CRISPR/Cas12b-MCDA——用于快速、灵敏且特异的某菌鉴定。在CRISPR/Cas12b-MCDA系统中,包含原间隔相邻基序(PAM)位点的MCDA扩增子被Cas12b/gRNA复合物识别,该复合物结合靶区域并触发对单链DNA(ssDNA)报告分子的某菌切割。CRISPR/Cas12b-MCDA检测对合成基因组DNA的检测限为10 fg/μL,对某菌表现出100%的特异性,对其他某菌或非某菌种无交叉反应。模板提取的预扩增需要20分钟,然后尿嘧啶DNA糖基化酶(UDG)消化需要5分钟,MCDA扩增需要45分钟。使用实时荧光分析时总检测时间为75分钟,使用侧向流动生物传感器(LFB)时为90分钟。此外,使用紫外线可视化对结果进行验证以确认CRISPR/Cas12b-MCDA的结果。值得注意的是,LFB和紫外线分析均无需仪器,提高了其可及性。总之,CRISPR/Cas12b-MCDA检测是一种用于检测某菌的简单、快速、灵敏、特异且可靠的方法。

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