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(鲤形目、鲤科、鱊亚科)的线粒体全基因组:特征与系统发育分析

Complete Mitochondrial Genome of (Cypriniformes, Cyprinidae, and Acheilognathinae): Characterization and Phylogenetic Analysis.

作者信息

Li Zhengran, Yu Jinhui, Zhou Chuanjiang

机构信息

The Observation and Research Field Station of Taihang Mountain Forest Ecosystems of Henan Province College of Life Sciences, Henan Normal University Xinxiang People's Republic of China.

出版信息

Ecol Evol. 2025 Aug 3;15(8):e71909. doi: 10.1002/ece3.71909. eCollection 2025 Aug.

Abstract

In this study, the mitochondrial genome data of were subjected to a multigene tandem method to elucidate its taxonomic status. The total length of the mitochondrial genome was determined to be 16,779 bp, including 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and the D-loop region. Overall, there was a strong AT bias and anti-G bias; different protein-coding genes exhibited different degrees of codon preference. The rest of the amino acids, with the exception of tRNA, of the 22 tRNAs were in one form, the secondary structure was incomplete, and the remaining tRNAs folded to form the secondary structure of a typical clover. Thirteen protein-coding genes of and were concatenated to explore their phylogenetic relationships, with as the outgroup. The results revealed that , , and were the most closely related. This research would supplement the mitochondrial genome data, serving as a molecular basis for safeguarding species, facilitating genetic classification, and investigating Acheilognathinae phylogeny.

摘要

在本研究中,对[物种名称]的线粒体基因组数据采用多基因串联法来阐明其分类地位。线粒体基因组全长测定为16779 bp,包括13个蛋白质编码基因、2个rRNA基因、22个tRNA基因以及D环区域。总体而言,存在强烈的AT偏好和抗G偏好;不同的蛋白质编码基因表现出不同程度的密码子偏好。22个tRNA中除tRNA外的其余氨基酸呈一种形式,二级结构不完整,其余tRNA折叠形成典型三叶草的二级结构。将[物种名称]的13个蛋白质编码基因串联起来以探索它们的系统发育关系,以[外类群物种名称]作为外类群。结果表明,[物种名称1]、[物种名称2]和[物种名称3]关系最为密切。本研究将补充[物种名称]的线粒体基因组数据,为物种保护、促进遗传分类以及研究鳑鲏亚科系统发育提供分子依据。

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