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基于结构的药物设计产生二芳基嘧啶衍生物作为有效的HIV-1非核苷逆转录酶抑制剂。

Structure-Based Drug Design Yields Diarylpyrimidine Derivatives as Potent HIV-1 Non-Nucleoside Reverse Transcriptase Inhibitors.

作者信息

Zhou Zhenzhen, Guo Jie, Li Xin, Wu Jinyuan, Clercq Erik De, Pannecouque Christophe, Zhan Peng, Kang Dongwei, Liu Xinyong

机构信息

Department of Medicinal Chemistry, Shandong Key Laboratory of Druggability Optimization and Evaluation for Lead Compounds, Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, 44 West Culture Road, 250012 Jinan, Shandong, P. R. China.

Rega Institute for Medical Research, Laboratory of Virology and Chemotherapy, K.U. Leuven, Herestraat 49 Postbus 1043 (09.A097), B-3000 Leuven, Belgium.

出版信息

ACS Infect Dis. 2025 Sep 12;11(9):2607-2616. doi: 10.1021/acsinfecdis.5c00519. Epub 2025 Aug 6.

Abstract

Human immunodeficiency virus type-1 (HIV-1) resistance severely compromises the efficacy of non-nucleoside reverse transcriptase inhibitors (NNRTIs). This study developed novel DAPY-derived NNRTIs via a structure-based drug design strategy with as the lead. All designed compounds demonstrate potent antiviral activity against the HIV-1 wild-type (WT) strain (EC = 3.03-21.1 nM). Notably, compound was identified as the most potent inhibitor against a panel of clinically relevant mutant strains (EC = 5.03-37.7 nM) with resistance fold (RF) values (RF = 0.746-5.59) superior to that of ETR (RF = 1.11-15.5). Mechanistic studies confirmed that potently inhibits HIV-1 RT (IC = 0.107 μM). Molecular docking and MM/GBSA calculations validate its stable binding with NNIBP, mediated by extensive hydrogen bond networks, hydrophobic interactions, and π-π stacking. Collectively, this work delivers as a highly promising next-generation NNRTI lead compound with exceptional resilience against drug-resistant HIV-1.

摘要

1型人类免疫缺陷病毒(HIV-1)耐药性严重损害了非核苷类逆转录酶抑制剂(NNRTIs)的疗效。本研究通过以[具体物质]为先导的基于结构的药物设计策略开发了新型的二氮杂卓并嘧啶(DAPY)衍生的NNRTIs。所有设计的化合物均对HIV-1野生型(WT)毒株表现出强效抗病毒活性(EC₅₀ = 3.03 - 21.1 nM)。值得注意的是,化合物[具体编号]被鉴定为针对一组临床相关突变株最有效的抑制剂(EC₅₀ = 5.03 - 37.7 nM),其耐药倍数(RF)值(RF = 0.746 - 5.59)优于依法韦仑(ETR)(RF = 1.11 - 15.5)。机制研究证实[具体编号]能有效抑制HIV-1逆转录酶(IC₅₀ = 0.107 μM)。分子对接和MM/GBSA计算验证了其与非核苷类逆转录酶抑制剂结合口袋(NNIBP)的稳定结合,这是由广泛的氢键网络、疏水相互作用和π-π堆积介导的。总的来说,这项工作提供了[具体编号]作为一种极具前景的下一代NNRTI先导化合物,对耐药HIV-1具有出色的抗性。

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