在IAVI G001人体疫苗试验中引发的具有不同轻链的VRC01类广谱中和抗体前体的结构见解。

Structural insights into VRC01-class bnAb precursors with diverse light chains elicited in the IAVI G001 human vaccine trial.

作者信息

Lin Xiaohe, Cottrell Christopher A, Kalyuzhniy Oleksandr, Tingle Ryan, Kubitz Michael, Lu Danny, Yuan Meng, Schief William R, Wilson Ian A

机构信息

Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037.

Center for HIV/AIDS Vaccine Development, The Scripps Research Institute, La Jolla, CA 92037.

出版信息

Proc Natl Acad Sci U S A. 2025 Aug 19;122(33):e2510163122. doi: 10.1073/pnas.2510163122. Epub 2025 Aug 11.

Abstract

The development of germline-targeting vaccines represents a potentially transformative strategy to elicit broadly neutralizing antibodies (bnAbs) against HIV and other antigenically diverse pathogens. Here, we report on structural characterization of vaccine-elicited VRC01-class bnAb precursors in the IAVI G001 Phase 1 clinical trial with the eOD-GT8 60mer nanoparticle as immunogen. High-resolution X-ray structures of eOD-GT8 monomer complexed with Fabs of five VRC01-class bnAb precursors with >90% germline identity revealed a conserved mode of binding to the HIV CD4-binding site via IGHV1-2-encoded heavy chains, mirroring mature bnAb interactions. The light-chain V-gene diversity emulated VRC01 bnAbs and stabilized antigen engagement, while their conserved five-residue LCDR3 motifs prevented steric clashes. Notably, the VRC01-class bnAb precursors accommodated the N276 glycan, a key barrier in HIV Env recognition, through structural rearrangements in HCDR3 or LCDR1, despite its absence in the immunogen. Surface plasmon resonance analysis showed that 87% of elicited antibodies retained glycan binding capacity, albeit with reduced affinity. These findings validate the ability of eOD-GT8 60mer nanoparticles to prime VRC01-class bnAb precursors with native-like paratopes but with intrinsic glycan adaptability. Structural mimicry of mature bnAbs was observed even with limited somatic hypermutation, indicating that critical features are encoded in the germline repertoire. The structures highlight how germline-encoded features drive bnAb-like recognition at early stages. This work provides molecular evidence supporting germline targeting in humans and provides guidance for designing booster immunogens to shepherd affinity maturation toward broad neutralization.

摘要

靶向生殖系的疫苗的开发代表了一种潜在的变革性策略,可引发针对HIV和其他抗原多样病原体的广泛中和抗体(bnAbs)。在此,我们报告了在IAVI G001 1期临床试验中,以eOD-GT8 60聚体纳米颗粒作为免疫原时,疫苗引发的VRC01类bnAb前体的结构特征。eOD-GT8单体与5种生殖系同源性>90%的VRC01类bnAb前体的Fab片段复合的高分辨率X射线结构显示,通过IGHV1-2编码的重链与HIV CD4结合位点的结合模式保守,这与成熟bnAb的相互作用相似。轻链V基因多样性模拟了VRC01 bnAbs并稳定了抗原结合,而其保守的五残基LCDR3基序防止了空间冲突。值得注意的是,尽管免疫原中不存在N276聚糖,但VRC01类bnAb前体通过HCDR3或LCDR1中的结构重排容纳了该聚糖,而N276聚糖是HIV Env识别中的关键障碍。表面等离子体共振分析表明,87%的诱导抗体保留了聚糖结合能力,尽管亲和力有所降低。这些发现验证了eOD-GT8 60聚体纳米颗粒引发具有天然样互补位但具有内在聚糖适应性的VRC01类bnAb前体的能力。即使体细胞超突变有限,也观察到了成熟bnAbs的结构模拟,表明关键特征在生殖系库中编码。这些结构突出了生殖系编码特征在早期阶段如何驱动类似bnAb的识别。这项工作提供了支持人类生殖系靶向的分子证据,并为设计加强免疫原以引导亲和力成熟走向广泛中和提供了指导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c671/12377726/fcae49063fba/pnas.2510163122fig01.jpg

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