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REST/NRSF通过抑制其他细胞命运来维持肌肉干细胞特性。

REST/NRSF Preserves muscle stem cell identity by repressing alternate cell fate.

作者信息

Sahinyan Korin, Blackburn Darren M, Simon Marie-Michelle, Lazure Felicia, Kwan Tony, Wilson David H, Vahidyeganeh Maryam, Alsadi Nawal, von Maltzahn Julia, Yamada Yasuhiro, Jahani-Asl Arezu, Bourque Guillaume, Rudnicki Michael A, Soleimani Vahab D

机构信息

Department of Human Genetics, McGill University, 3640 rue University, Montréal, QC, Canada.

Lady Davis Institute for Medical Research, Jewish General Hospital, 3755 Chem. de la Côte-Sainte-Catherine, Montréal, QC, Canada.

出版信息

Nat Commun. 2025 Aug 12;16(1):7487. doi: 10.1038/s41467-025-62758-y.

DOI:10.1038/s41467-025-62758-y
PMID:40796549
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12343973/
Abstract

Cell fate and identity require timely activation of lineage-specific and concomitant repression of alternate-lineage genes. How this process is epigenetically encoded remains largely unknown. In skeletal muscle stem cells, the myogenic regulatory factors are well-established drivers of muscle gene activation but less is known about how non-muscle gene repression is achieved. Here, we show that the master epigenetic regulator, Repressor Element 1-Silencing Transcription factor (REST), also known as Neuron-Restrictive Silencer Factor (NRSF), is a key regulator of this process. We show that many non-lineage genes retain permissive chromatin state but are actively repressed by REST. Loss of functional REST in muscle stem cells and progenitors disrupts muscle specific epigenetic and transcriptional signatures, impairs differentiation, and triggers apoptosis in progenitor cells, leading to depletion of the stem cell pool. Consequently, REST-deficient skeletal muscle exhibits impaired regeneration and reduced myofiber growth postnatally. Collectively, our data suggests that REST plays a key role in safeguarding muscle stem cell identity by repressing multiple non-muscle lineage and developmentally regulated genes in adult mice.

摘要

细胞命运和特性需要谱系特异性基因的及时激活以及对其他谱系基因的同步抑制。这个过程如何通过表观遗传学编码在很大程度上仍然未知。在骨骼肌干细胞中,成肌调节因子是肌肉基因激活的公认驱动因素,但对于如何实现非肌肉基因的抑制了解较少。在这里,我们表明主要的表观遗传调节因子,即抑制元件1沉默转录因子(REST),也称为神经元限制性沉默因子(NRSF),是这一过程的关键调节因子。我们发现许多非谱系基因保持着允许的染色质状态,但被REST积极抑制。肌肉干细胞和祖细胞中功能性REST的缺失会破坏肌肉特异性表观遗传和转录特征,损害分化,并触发祖细胞凋亡,导致干细胞池的耗竭。因此,缺乏REST的骨骼肌在出生后表现出再生受损和肌纤维生长减少。总的来说,我们的数据表明,REST通过抑制成年小鼠中的多个非肌肉谱系和发育调控基因,在维护肌肉干细胞特性方面发挥关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/b1691b123fcc/41467_2025_62758_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/bab486074c76/41467_2025_62758_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/98fbb6239de3/41467_2025_62758_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/98b7bf213345/41467_2025_62758_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/a6ccd1148566/41467_2025_62758_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/b824e92b8654/41467_2025_62758_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/b1691b123fcc/41467_2025_62758_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/bab486074c76/41467_2025_62758_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/98fbb6239de3/41467_2025_62758_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/98b7bf213345/41467_2025_62758_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/a6ccd1148566/41467_2025_62758_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/b824e92b8654/41467_2025_62758_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73b/12343973/b1691b123fcc/41467_2025_62758_Fig6_HTML.jpg

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本文引用的文献

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Epigenetic control of myogenic identity of human muscle stem cells in Duchenne muscular dystrophy.杜兴氏肌肉营养不良症中人类肌肉干细胞成肌特性的表观遗传控制
iScience. 2024 Nov 8;27(12):111350. doi: 10.1016/j.isci.2024.111350. eCollection 2024 Dec 20.
2
The E3 ubiquitin ligase Nedd4L preserves skeletal muscle stem cell quiescence by inhibiting their activation.E3泛素连接酶Nedd4L通过抑制骨骼肌干细胞的激活来维持其静止状态。
iScience. 2024 Jun 11;27(7):110241. doi: 10.1016/j.isci.2024.110241. eCollection 2024 Jul 19.
3
Analysis of REST binding sites with canonical and non-canonical motifs in human cell lines.
分析人类细胞系中具有典型和非典型基序的 REST 结合位点。
BMC Med Genomics. 2024 Apr 17;17(Suppl 1):92. doi: 10.1186/s12920-024-01860-4.
4
Canalizing cell fate by transcriptional repression.通过转录抑制来调控细胞命运。
Mol Syst Biol. 2024 Mar;20(3):144-161. doi: 10.1038/s44320-024-00014-z. Epub 2024 Feb 1.
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Transcriptional reprogramming of skeletal muscle stem cells by the niche environment.基质微环境对骨骼肌干细胞的转录重编程。
Nat Commun. 2023 Feb 1;14(1):535. doi: 10.1038/s41467-023-36265-x.
6
The NRSF/REST transcription factor in hallmarks of cancer: From molecular mechanisms to clinical relevance.NRSF/REST 转录因子与癌症的标志性特征:从分子机制到临床相关性。
Biochimie. 2023 Mar;206:116-134. doi: 10.1016/j.biochi.2022.10.012. Epub 2022 Oct 23.
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ATAC-Seq of a Single Myofiber from .来自……的单个肌纤维的转座酶可及性染色质测序
Bio Protoc. 2022 Jun 20;12(12). doi: 10.21769/BioProtoc.4452.
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Elife. 2022 Feb 21;11:e72792. doi: 10.7554/eLife.72792.
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Chromatin and transcription factor profiling in rare stem cell populations using CUT&Tag.使用 CUT&Tag 技术对罕见干细胞群体进行染色质和转录因子分析。
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