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AnimalAI:一个使用交互式深度学习分割进行动物活动指数自动计算的开源网络平台。

AnimalAI: An Open-Source Web Platform for Automated Animal Activity Index Calculation Using Interactive Deep Learning Segmentation.

作者信息

Saeidifar Mahtab, Li Guoming, Ramaswamy Lakshmish Macheeri, Chen Chongxiao, Asali Ehsan

机构信息

Institute for Artificial Intelligence, Franklin College of Arts and Sciences, University of Georgia, Athens, GA 30602, USA.

Department of Poultry Science, College of Agricultural and Environmental Sciences, University of Georgia, Athens, GA 30602, USA.

出版信息

Animals (Basel). 2025 Aug 3;15(15):2269. doi: 10.3390/ani15152269.

Abstract

Monitoring the activity index of animals is crucial for assessing their welfare and behavior patterns. However, traditional methods for calculating the activity index, such as pixel intensity differencing of entire frames, are found to suffer from significant interference and noise, leading to inaccurate results. These classical approaches also do not support group or individual tracking in a user-friendly way, and no open-access platform exists for non-technical researchers. This study introduces an open-source web-based platform that allows researchers to calculate the activity index from top-view videos by selecting individual or group animals. It integrates Segment Anything Model2 (SAM2), a promptable deep learning segmentation model, to track animals without additional training or annotation. The platform accurately tracked Cobb 500 male broilers from weeks 1 to 7 with a 100% success rate, IoU of 92.21% ± 0.012, precision of 93.87% ± 0.019, recall of 98.15% ± 0.011, and F1 score of 95.94% ± 0.006, based on 1157 chickens. Statistical analysis showed that tracking 80% of birds in week 1, 60% in week 4, and 40% in week 7 was sufficient (r ≥ 0.90; ≤ 0.048) to represent the group activity in respective ages. This platform offers a practical, accessible solution for activity tracking, supporting animal behavior analytics with minimal effort.

摘要

监测动物的活动指数对于评估它们的福利和行为模式至关重要。然而,人们发现传统的计算活动指数的方法,如对整个帧进行像素强度差分,会受到严重干扰和噪声的影响,导致结果不准确。这些经典方法也不能以用户友好的方式支持群体或个体跟踪,并且不存在供非技术研究人员使用的开放获取平台。本研究介绍了一个基于网络的开源平台,该平台允许研究人员通过选择个体或群体动物,从俯视视频中计算活动指数。它集成了可提示的深度学习分割模型Segment Anything Model2(SAM2),无需额外训练或标注即可跟踪动物。该平台以100%的成功率、92.21%±0.012的交并比(IoU)、93.87%±0.019的精度、98.15%±好0.011的召回率和95.94%±0.006的F1分数,准确跟踪了1157只科宝500雄性肉鸡从第1周到第7周的情况。统计分析表明,在第1周跟踪80%的鸡、第4周跟踪60%的鸡和第7周跟踪40%的鸡,就足以(r≥0.90;P≤0.048)代表各年龄段的群体活动。该平台为活动跟踪提供了一个实用、便捷的解决方案,以最小的工作量支持动物行为分析。

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